Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq403 163 4e-34
seq393 131 2e-24
>seq403
Length=285126
Score = 163 bits (180), Expect = 4e-34
Identities = 211/288 (73%), Gaps = 5/288 (2%)
Strand=Plus/Minus
Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838
||| |||||||| || ||||||||||| || || ||||||||||||||| | || |||
Sbjct 108291 TGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCTC 108233
Query 1455839 CGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895
| ||| | ||||| || ||| ||||||||||||| ||||||| ||
Sbjct 108232 CAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTTTTCATCTCCCA 108173
Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955
||||| |||||||| ||||||| |||||||| || ||||||| ||| || ||||
Sbjct 108172 TGTCCTTGCCTTTTT-CGCCGCCTCGGATGGCATTGTCAACGAGAACTTGGTCGAACGCT 108114
Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015
| | || || ||| | || ||||| || | || ||||| ||||||||| || |
Sbjct 108113 TCTCCAGCGAAGTACAAATTCCCGAGGCGCGCTGCTTCTACGGTTTCCAGATCATGATGG 108054
Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063
| ||| |||||||||| || ||||| ||||| |||||||| ||| |||
Sbjct 108053 AGAACGTCCACTCTGAGACTTACTCTCTCCTTATCGACACATACATCA 108006
Score = 156 bits (172), Expect = 6e-32
Identities = 244/339 (72%), Gaps = 14/339 (4%)
Strand=Plus/Minus
Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACC 1456507
||| ||||| ||||||||||| ||||||| | | ||| ||||||| | | | |
Sbjct 107712 GGTATGCACACCGACTTTGCCTGCCTGCTCTTCTCT---CTCCTCAACAACCGCCCCAGC 107656
Query 1456508 GACG-TGCC--CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGC 1456564
| | ||| | || |||||| ||| || |||||||| ||| | ||||| |||||
Sbjct 107655 AAGGCTGCTGTCGAGGCTATCATCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCTCAGC 107596
Query 1456565 GAGTCGCTGCCGGTGGCGCTCATC--GGCATGAACGCCACCGCTCATGTGCCAGTACATT 1456622
|| |||| || | |||||| || ||||||||||||| | ||||||||||||||||||
Sbjct 107595 GACGCGCTTCC--TTGCGCTCTTCTCGGCATGAACGCCA-CTCTCATGTGCCAGTACATT 107539
Query 1456623 GAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGG 1456682
| | || ||||||||||| |||||| || |||||| | ||| ||||| |
Sbjct 107538 G-AGTTCGTCGCCGACCGTCTGCTCCTTGCTCTCGGCAAC-CCCAAGTACTACAACGCCA 107481
Query 1456683 CCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGC 1456742
||||||| ||| | |||||| |||||||| | |||||||||||||| ||||||
Sbjct 107480 CCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGA 107421
Query 1456743 GCCGCG-TGGCGAGTACGCCAAGGCCGGCGTCACCGCCA 1456780
|| | ||| || ||| |||||||| |||| ||||
Sbjct 107420 AGCGTGTTGGTGACTACCAAAAGGCCGGTGTCATGGCCA 107382
>seq393
Length=255347
Score = 131 bits (144), Expect = 2e-24
Identities = 209/300 (70%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942
|| ||||| ||||||||| ||| || || || |||| || || || || ||
Sbjct 191513 ACTTACGACTACATGTCGCAAAAGTACTTTACACACGCCTCGCCAACCCTGTTCAACGCA 191572
Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002
||||| || || |||| || || ||||| || | |||||||||| || |||
Sbjct 191573 GGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATC 191632
Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062
|| |||||||| ||||| |||||| ||||| | ||||||||| | || ||||| ||
Sbjct 191633 GACGGCATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCGCTGGCGGTATT 191692
Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122
||| | || ||| | || ||| | ||| ||||| | | |||||||||||
Sbjct 191693 GGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTACATTGGCGGCACCAACGGAACA 191752
Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|| ||||| || | |||||||| || || | ||| |||| || |||||||||||||||
Sbjct 191753 TCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACGTCGACCAG 191812
Score = 100 bits (110), Expect = 4e-15
Identities = 353/543 (65%), Gaps = 20/543 (4%)
Strand=Plus/Plus
Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCT 262937
|||||||||||| | || ||| | || ||||| || | ||||||||| ||||
Sbjct 192685 CTGGGACTGGGATGAGCTCAAGGCCAAGATTGCCCAGCACGGTGTCCGCAACTCGCTGCT 192744
Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997
| | || | |||||| || ||| | || |||||||| || || |||| |||| |||||
Sbjct 192745 CATCGCACCCATGCCAACTGCCTCCACCTCGCAGATTCTCGGAAACAACGAGTGCTTCGA 192804
Query 262998 GGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056
| ||| ||| |||||| ||| | ||||| |||||| | || || || |||||||
Sbjct 192805 -GCCATACACTTCCAACATTTACTCTCGCCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCA 192863
Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116
||| ||| ||||| | | || | ||||||||| | || | |||
Sbjct 192864 ACCCATGGCTGCTCAAGGACCTTGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACC 192923
Query 263117 GGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGAT- 263175
| |||| || | |||| | | | || || |||| | | ||||||
Sbjct 192924 GCATCATCGCCG---AGGG-TGGTTCCA----TTGCACGAATTCCCAATATC-CCCGATG 192974
Query 263176 --CTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGG 263233
||||| || | |||||| || ||||| | | | || | ||| || ||||
Sbjct 192975 AGACCAAGGAGCTTTACAAGACTGTTTGGGAAATCTCGCAGCGCAGAATCATCGAGATGG 193034
Query 263234 CGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC 263293
| |||||||| | ||| | |||||||| ||||||| | ||| | || | || |
Sbjct 193035 CTGCCGACCGTGGTGCCTTTATCGACCAGTCCCAGTCGTTGAACATCCACATGAAGGAGC 193094
Query 263294 CGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350
| || || | || ||||||||||||||| || ||| | || || ||||
Sbjct 193095 CTACCATGGGCAAG---ATCACGTCGATGCACTTTGCTGGATGGAAGCTTGGTCTTAAGA 193151
Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410
| ||||||||||| || || ||| | |||| || | | ||||||||||||||||| |
Sbjct 193152 CGGGCATGTACTACCTCCGTACCATGGCCGCCTCCGCCCCTATTCAATTCACCGTCGACC 193211
Query 263411 AGG 263413
|||
Sbjct 193212 AGG 193214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177771268939068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |