Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq403 163 4e-34 seq393 131 2e-24 >seq403 Length=285126 Score = 163 bits (180), Expect = 4e-34 Identities = 211/288 (73%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838 ||| |||||||| || ||||||||||| || || ||||||||||||||| | || ||| Sbjct 108291 TGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCTC 108233 Query 1455839 CGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 | ||| | ||||| || ||| ||||||||||||| ||||||| || Sbjct 108232 CAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTTTTCATCTCCCA 108173 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 ||||| |||||||| ||||||| |||||||| || ||||||| ||| || |||| Sbjct 108172 TGTCCTTGCCTTTTT-CGCCGCCTCGGATGGCATTGTCAACGAGAACTTGGTCGAACGCT 108114 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | | || || ||| | || ||||| || | || ||||| ||||||||| || | Sbjct 108113 TCTCCAGCGAAGTACAAATTCCCGAGGCGCGCTGCTTCTACGGTTTCCAGATCATGATGG 108054 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063 | ||| |||||||||| || ||||| ||||| |||||||| ||| ||| Sbjct 108053 AGAACGTCCACTCTGAGACTTACTCTCTCCTTATCGACACATACATCA 108006 Score = 156 bits (172), Expect = 6e-32 Identities = 244/339 (72%), Gaps = 14/339 (4%) Strand=Plus/Minus Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACC 1456507 ||| ||||| ||||||||||| ||||||| | | ||| ||||||| | | | | Sbjct 107712 GGTATGCACACCGACTTTGCCTGCCTGCTCTTCTCT---CTCCTCAACAACCGCCCCAGC 107656 Query 1456508 GACG-TGCC--CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGC 1456564 | | ||| | || |||||| ||| || |||||||| ||| | ||||| ||||| Sbjct 107655 AAGGCTGCTGTCGAGGCTATCATCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCTCAGC 107596 Query 1456565 GAGTCGCTGCCGGTGGCGCTCATC--GGCATGAACGCCACCGCTCATGTGCCAGTACATT 1456622 || |||| || | |||||| || ||||||||||||| | |||||||||||||||||| Sbjct 107595 GACGCGCTTCC--TTGCGCTCTTCTCGGCATGAACGCCA-CTCTCATGTGCCAGTACATT 107539 Query 1456623 GAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGG 1456682 | | || ||||||||||| |||||| || |||||| | ||| ||||| | Sbjct 107538 G-AGTTCGTCGCCGACCGTCTGCTCCTTGCTCTCGGCAAC-CCCAAGTACTACAACGCCA 107481 Query 1456683 CCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGC 1456742 ||||||| ||| | |||||| |||||||| | |||||||||||||| |||||| Sbjct 107480 CCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGA 107421 Query 1456743 GCCGCG-TGGCGAGTACGCCAAGGCCGGCGTCACCGCCA 1456780 || | ||| || ||| |||||||| |||| |||| Sbjct 107420 AGCGTGTTGGTGACTACCAAAAGGCCGGTGTCATGGCCA 107382 >seq393 Length=255347 Score = 131 bits (144), Expect = 2e-24 Identities = 209/300 (70%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942 || ||||| ||||||||| ||| || || || |||| || || || || || Sbjct 191513 ACTTACGACTACATGTCGCAAAAGTACTTTACACACGCCTCGCCAACCCTGTTCAACGCA 191572 Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002 ||||| || || |||| || || ||||| || | |||||||||| || ||| Sbjct 191573 GGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATC 191632 Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062 || |||||||| ||||| |||||| ||||| | ||||||||| | || ||||| || Sbjct 191633 GACGGCATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCGCTGGCGGTATT 191692 Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122 ||| | || ||| | || ||| | ||| ||||| | | ||||||||||| Sbjct 191693 GGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTACATTGGCGGCACCAACGGAACA 191752 Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || ||||| || | |||||||| || || | ||| |||| || ||||||||||||||| Sbjct 191753 TCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACGTCGACCAG 191812 Score = 100 bits (110), Expect = 4e-15 Identities = 353/543 (65%), Gaps = 20/543 (4%) Strand=Plus/Plus Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCT 262937 |||||||||||| | || ||| | || ||||| || | ||||||||| |||| Sbjct 192685 CTGGGACTGGGATGAGCTCAAGGCCAAGATTGCCCAGCACGGTGTCCGCAACTCGCTGCT 192744 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 | | || | |||||| || ||| | || |||||||| || || |||| |||| ||||| Sbjct 192745 CATCGCACCCATGCCAACTGCCTCCACCTCGCAGATTCTCGGAAACAACGAGTGCTTCGA 192804 Query 262998 GGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056 | ||| ||| |||||| ||| | ||||| |||||| | || || || ||||||| Sbjct 192805 -GCCATACACTTCCAACATTTACTCTCGCCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCA 192863 Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116 ||| ||| ||||| | | || | ||||||||| | || | ||| Sbjct 192864 ACCCATGGCTGCTCAAGGACCTTGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACC 192923 Query 263117 GGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGAT- 263175 | |||| || | |||| | | | || || |||| | | |||||| Sbjct 192924 GCATCATCGCCG---AGGG-TGGTTCCA----TTGCACGAATTCCCAATATC-CCCGATG 192974 Query 263176 --CTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGG 263233 ||||| || | |||||| || ||||| | | | || | ||| || |||| Sbjct 192975 AGACCAAGGAGCTTTACAAGACTGTTTGGGAAATCTCGCAGCGCAGAATCATCGAGATGG 193034 Query 263234 CGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC 263293 | |||||||| | ||| | |||||||| ||||||| | ||| | || | || | Sbjct 193035 CTGCCGACCGTGGTGCCTTTATCGACCAGTCCCAGTCGTTGAACATCCACATGAAGGAGC 193094 Query 263294 CGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350 | || || | || ||||||||||||||| || ||| | || || |||| Sbjct 193095 CTACCATGGGCAAG---ATCACGTCGATGCACTTTGCTGGATGGAAGCTTGGTCTTAAGA 193151 Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410 | ||||||||||| || || ||| | |||| || | | ||||||||||||||||| | Sbjct 193152 CGGGCATGTACTACCTCCGTACCATGGCCGCCTCCGCCCCTATTCAATTCACCGTCGACC 193211 Query 263411 AGG 263413 ||| Sbjct 193212 AGG 193214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177771268939068