Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq225 141 8e-29 >seq225 Length=197037 Score = 141 bits (156), Expect = 8e-29 Identities = 184/251 (73%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 35491 TACAATCA--TCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCC 35548 || ||||| || ||| | ||||||||||| | | ||||||||| | ||| |||| Sbjct 138938 TAAAATCACGTCACTTACTGTCCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCC 138879 Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 || || |||||||| || | | ||| || |||| || || |||||||| ||||| || Sbjct 138878 TTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATG 138819 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668 | || |||||||||| ||| | || ||||||||| |||||| ||| | |||| | Sbjct 138818 AGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTTAC-GTTGTC 138760 Query 35669 -ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 | |||||||| ||||||||||||| ||||| || || || || | ||| || || || Sbjct 138759 GATGGTGTCGCTGGATTCCACCTCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAA 138700 Query 35728 TATCTGCATTC 35738 || ||||||| Sbjct 138699 GATTTGCATTC 138689 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || || |||| || ||||||||||| || || Sbjct 138654 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAA 138595 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||||| ||| | | |||||||||| ||||| ||| | | | Sbjct 138594 GATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACATT 138535 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || || |||| |||||| || || || |||| || || || Sbjct 138534 GTCAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGAC 138475 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 138474 GAAGATCTGCAT 138463 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| || ||| || | || || || ||||| || || || Sbjct 138426 CTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAA 138367 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| |||| |||| || ||||||||| ||||| ||| | || Sbjct 138366 AATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGAATCTTCGACTTGA-CGT 138308 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 || | | |||||| ||| || || || | |||||| || || || |||| Sbjct 138307 TGTCAATGGTGTCGGACGACTCGACTTCAAGCGTGATGGTCTTGCCGGTCA 138257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791267143120