Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq225 141 8e-29
>seq225
Length=197037
Score = 141 bits (156), Expect = 8e-29
Identities = 184/251 (73%), Gaps = 4/251 (2%)
Strand=Plus/Minus
Query 35491 TACAATCA--TCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCC 35548
|| ||||| || ||| | ||||||||||| | | ||||||||| | ||| ||||
Sbjct 138938 TAAAATCACGTCACTTACTGTCCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCC 138879
Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608
|| || |||||||| || | | ||| || |||| || || |||||||| ||||| ||
Sbjct 138878 TTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATG 138819
Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668
| || |||||||||| ||| | || ||||||||| |||||| ||| | |||| |
Sbjct 138818 AGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTTAC-GTTGTC 138760
Query 35669 -ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
| |||||||| ||||||||||||| ||||| || || || || | ||| || || ||
Sbjct 138759 GATGGTGTCGCTGGATTCCACCTCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAA 138700
Query 35728 TATCTGCATTC 35738
|| |||||||
Sbjct 138699 GATTTGCATTC 138689
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||| || || || |||| || ||||||||||| || ||
Sbjct 138654 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAA 138595
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||| ||||||| ||| | | |||||||||| ||||| ||| | | |
Sbjct 138594 GATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACATT 138535
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || || || |||| |||||| || || || |||| || || ||
Sbjct 138534 GTCAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGAC 138475
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 138474 GAAGATCTGCAT 138463
Score = 89.7 bits (98), Expect = 5e-13
Identities = 124/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| |||| || ||| || | || || || ||||| || || ||
Sbjct 138426 CTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAA 138367
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| |||| |||| || ||||||||| ||||| ||| | ||
Sbjct 138366 AATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGAATCTTCGACTTGA-CGT 138308
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
|| | | |||||| ||| || || || | |||||| || || || ||||
Sbjct 138307 TGTCAATGGTGTCGGACGACTCGACTTCAAGCGTGATGGTCTTGCCGGTCA 138257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450791267143120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |