Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq393 149 6e-31
seq225 125 7e-24
>seq393
Length=255347
Score = 149 bits (164), Expect = 6e-31
Identities = 287/420 (68%), Gaps = 5/420 (1%)
Strand=Plus/Plus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||||||||| |||| || || || ||||| |||||||| |||||||| ||| |
Sbjct 191450 CAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGATGACATTGAAAAGGCCATT 191509
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| || ||| | ||||| || | ||||| ||||| ||||| ||| |||| |
Sbjct 191510 GAGACTTACGACTACATGTCGCAAAAGTACTTTACACACGCCTCGCCAACCCTGTTCAAC 191569
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
|| |||||| | || || ||||||| || || | | |||| |||||||||
Sbjct 191570 GCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATCGACATGAAGGAAGACAGC 191629
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGG 7802
||||||||||| ||| |||| || | || |||||| || ||||| || |||||
Sbjct 191630 ATCGACGGCATCTACGACACACT-CAAGACTTGCGCTTTGATCTCCAAGACCGCTGGCGG 191688
Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862
|| ||||| ||||| || | || |||| ||| | ||| | |||||||||
Sbjct 191689 TATTGGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTACATTGGCGGCACCAACGG 191748
Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922
|| | | | |||| | |||||| | || || | ||| ||| | | || | || ||
Sbjct 191749 AACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACGTCGA 191808
Query 7923 CCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979
|||||| || |||||| ||| ||| ||||||||| | ||||| |||||||| ||
Sbjct 191809 CCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCTGA 191868
Score = 84.2 bits (92), Expect = 2e-11
Identities = 441/695 (63%), Gaps = 22/695 (3%)
Strand=Plus/Plus
Query 8254 GAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGC 8313
|| || |||| || | ||||| ||||| || ||||||||| ||| ||||| || |
Sbjct 192143 GAGACTGGTAACCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAG 192202
Query 8314 AACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCC 8373
||| ||||||||||| | || ||| || ||| | || ||||| |||||| || ||
Sbjct 192203 AACCTGGGCACCATTCGCAGCTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCT 192262
Query 8374 GACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGC 8433
|| || || || || ||||| || || ||| | | | || ||| || |||||
Sbjct 192263 GATGAGGTCGCTGTCTGCAACCTGGCTTCGCTCGCTCT----GCCTTCATTTGTCGAC-T 192317
Query 8434 TCAAACACTTACGACTTTGAACAATTGAAAA-----ACGCCGT---GCAAGTGACGGTA- 8484
||| | | ||| ||||| || |||| ||| || ||||| || |
Sbjct 192318 ACAAGCGC-GGCGAGTTTGA--CTTTCAAAAGCTGCACGAGGTTACCCAAGT--CGTCAC 192372
Query 8485 -CGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCG-CGTAT 8542
||||| || | || ||||| ||||| || ||| | || || ||||| || |
Sbjct 192373 CCGCAACTTGAACAAGATTATTGAGGTCAACCACTACCCCGTTGAGGAGGCGCGCCGCAG 192432
Query 8543 CGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCA 8602
| ||| | |||||| |||| |||| |||| || || ||||||||||| || || |
Sbjct 192433 C-AACTTCCGCCACCGACCTATTGGTATGGGTGTACAGGGTCTGGCCGATGCTTTCCTCG 192491
Query 8603 TGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAA 8662
||||||| |||| ||| | | | || | ||||||||| | || || |
Sbjct 192492 CCCTGCGCCTGCCCTTCGAGTCCAACCAGGCCAAGAAGCTCAACATTCAGATCTTCGAGA 192551
Query 8663 CGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACG 8722
| | || ||| ||| | | ||| | ||||| ||| | || | ||||
Sbjct 192552 CCATCTACCACGCCGCTCTGACTTCGTCCTGCGATATTGCCAAGGAACTTGGTCCTTACG 192611
Query 8723 AATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCA 8782
| | |||| ||| |||| | | || || | || |||||||||||| | |
Sbjct 192612 AGACCTACGAGGGATCTCCTGTCTCCAAGGGCATTCTCCAGTACGACATGTGGGAGAAGA 192671
Query 8783 CGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGC 8842
| || ||| | | ||| | ||| || | || ||| ||||| || |||| | |
Sbjct 192672 CCCCTACCGATCTCTGGGACTGGGATGAGCTCAAGGCCAAGATTGCCCAGCACGGTGTCC 192731
Query 8843 GCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACA 8902
|||| |||||| | | || |||||| || ||| | || | || || | |||||||
Sbjct 192732 GCAACTCGCTGCTCATCGCACCCATGCCAACTGCCTCCACCTCGCAGATTCTCGGAAACA 192791
Query 8903 ACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937
|||| | ||| ||||| | ||| |||| | |||
Sbjct 192792 ACGAGTGCTTCGAGCCATACACTTCCAACATTTAC 192826
>seq225
Length=197037
Score = 125 bits (138), Expect = 7e-24
Identities = 144/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || || ||||| ||||| ||||||||||||||| | |||| |
Sbjct 138452 AGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGG 138393
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| ||||| || || || || ||||||| ||||||||||| || || ||||| ||
Sbjct 138392 CCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCC 138333
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || ||||| ||| | ||||||||||| || || || || ||
Sbjct 138332 TTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACTTCAAGCGTG 138273
Query 134676 ATGGTTTTACCGGT 134689
||||| || |||||
Sbjct 138272 ATGGTCTTGCCGGT 138259
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||| || | || || || || ||||| ||||| || ||||||||||||
Sbjct 138178 CCTCCACGGAGGCGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 138119
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || || ||||| || ||||| || || ||
Sbjct 138118 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGGA 138059
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | |||||||| || |||||
Sbjct 138058 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 137999
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| || || || || || |||||
Sbjct 137998 TCAAGGGTGATCGTCTTGCCGGT 137976
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | ||| || | || || || || ||||| ||||| || |||||||||||||
Sbjct 138691 TTCCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGC 138632
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| || | ||| |||||||| || || || || || | |||||| || || || |
Sbjct 138631 TCAGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAG 138572
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || || || || || ||||| || ||||| ||| | ||||| || || || |
Sbjct 138571 GGATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAA 138512
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || | || || || || || || | || || ||||| || |||||
Sbjct 138511 CTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463
Score = 89.7 bits (98), Expect = 5e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
|| ||| || | || || | ||| | || || || || ||||| || |||||||||||
Sbjct 138921 CTGTCCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTC 138862
Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
| ||| | ||| || || || || || ||||| || | ||| ||||| || ||
Sbjct 138861 TGAGAGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGG 138802
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| ||||| || || ||||| || || || || ||| | |||||| |||||
Sbjct 138801 AGGGATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTC 138742
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||| || | || ||||| || || || | ||| || ||||| |||||||||
Sbjct 138741 CACCTCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 138690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505395784563280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |