Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq403 113 1e-19
seq393 93.3 1e-13
>seq403
Length=285126
Score = 113 bits (124), Expect = 1e-19
Identities = 130/174 (75%), Gaps = 1/174 (1%)
Strand=Plus/Minus
Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755
|| ||| | | | || || ||||| ||||| | || || || | || || |||||
Sbjct 107854 CACCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTT- 107796
Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815
| || |||||||||||||||||||| |||||||| || |||| |||||| ||||| |
Sbjct 107795 CATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCA 107736
Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
|||| || ||| ||| ||||||||| |||| |||||| ||||| || ||||
Sbjct 107735 ACGAGCTCATCTCTCGTGACGAGGGTATGCACACCGACTTTGCCTGCCTGCTCT 107682
>seq393
Length=255347
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037
|| || ||| ||||||| | ||||||| |||||||||||||| || || ||| |||
Sbjct 191765 ATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACGTCGACCAGGGTGGCAACAAG 191824
Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
|||||||| || || |||||||||| ||||| |||||||| ||
Sbjct 191825 CGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCTGA 191868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588327574870230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |