Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq403 113 1e-19 seq393 93.3 1e-13 >seq403 Length=285126 Score = 113 bits (124), Expect = 1e-19 Identities = 130/174 (75%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | | | || || ||||| ||||| | || || || | || || ||||| Sbjct 107854 CACCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTT- 107796 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 | || |||||||||||||||||||| |||||||| || |||| |||||| ||||| | Sbjct 107795 CATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCA 107736 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 |||| || ||| ||| ||||||||| |||| |||||| ||||| || |||| Sbjct 107735 ACGAGCTCATCTCTCGTGACGAGGGTATGCACACCGACTTTGCCTGCCTGCTCT 107682 >seq393 Length=255347 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| ||||||| | ||||||| |||||||||||||| || || ||| ||| Sbjct 191765 ATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACGTCGACCAGGGTGGCAACAAG 191824 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 |||||||| || || |||||||||| ||||| |||||||| || Sbjct 191825 CGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCTGA 191868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588327574870230