Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq393 306 5e-78 seq403 149 8e-31 >seq393 Length=255347 Score = 306 bits (338), Expect = 5e-78 Identities = 1125/1740 (65%), Gaps = 33/1740 (2%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 ||||| |||||||| || ||||| || || | |||||| | | ||||| || | | Sbjct 193170 CGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCGACGTG 193111 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGA 110480 | |||| ||| || || | |||| || ||||| ||| |||| |||| || | Sbjct 193110 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGACT--GGTCGATAA 193053 Query 110481 AGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCAT--CTTAATTTCCCAAACTGT 110538 || || || | || ||||| || |||| | || | | ||||||||||| || Sbjct 193052 AGGCACCACGGTCGGCAGCCATCTCGATGA--TTCTGCGCTGCGAGATTTCCCAAACAGT 192995 Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG--ATGGAACCCCCC 110596 || || | |||| | ||||| ||||||| || || |||| | |||||||| ||| Sbjct 192994 CTTGTAAAGCTCCTTGGTCTCATCGGGGATAT-TGGGA-ATTCGTGCAATGGAACCACCC 192937 Query 110597 GCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTG 110656 | | ||| | | |||||| | || ||||| || || || | ||||| ||| Sbjct 192936 TCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTG 192877 Query 110657 ACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTT 110716 | || |||||| | |||||||| ||||| | | ||| ||||| Sbjct 192876 AGCAGCCATGGGTTGACCACCTGGAACTCACCAGCGAGCACACGGCGAGAGTAAATGTTG 192817 Query 110717 GTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 110776 | |||||||| || ||||| || || || || | || || | ||||||||| |||||| Sbjct 192816 GAAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGC 192757 Query 110777 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACA 110836 || ||||| || | || ||| || | ||| | || || ||||||| || Sbjct 192756 ATGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCTCA 192697 Query 110837 TCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTT 110894 |||||||| || || | | || || || |||||||||| |||| || | || | Sbjct 192696 TCCCAGTCCCAGA-GATCGGTAGGGGTCTTCT-CCCACATGTCGTACTGGAGAATGCCCT 192639 Query 110895 GGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 110954 ||| | ||||| ||||| |||| || || | ||| | | | || | || ||| Sbjct 192638 TGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGGACCAAGTTCCTTGGCAATATCGCAGG 192579 Query 110955 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 111014 || ||| | ||||| || ||||| || ||||| || || | || |||||| | Sbjct 192578 ACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCT 192519 Query 111015 CATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCC 111073 | || || || | | || ||| | || |||| || ||||| || |||||| Sbjct 192518 GGTTGGACTCGAAGG-GCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACCC 192460 Query 111074 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 111133 | ||||||||||| ||| || | || ||||| ||||||||| || || Sbjct 192459 ATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTTG 192400 Query 111134 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 111193 ||||| | ||| | || ||| || | | || | || || || |||| | Sbjct 192399 ACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTTTGA 192340 Query 111194 TAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 | ||||| || || | | |||| | || || |||| || |||| ||| Sbjct 192339 AAGTCAAACTCGCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTTG 192280 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 || ||||| |||||| | | |||||||| | ||| || || || | |||||| || Sbjct 192279 CAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCTG 192220 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 ||| || |||| ||||| ||||| ||||| |||||| ||||||||||||||||| Sbjct 192219 CGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATA 192160 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGG 111432 |||| | || ||||| ||||| | | || ||||| | ||| | | || | ||| | Sbjct 192159 AAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTG-GGCGCG 192101 Query 111433 TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 111491 || | || ||||| | | | |||||| | ||| || ||||| ||||| | Sbjct 192100 AACCGTCTCG-CGGCCCTTGTTTTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGT 192042 Query 111492 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 111551 | || | |||| ||||| || || || || || | || | ||| | || Sbjct 192041 CGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCGT 191982 Query 111552 CTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 111611 || | || ||||||||||| | ||| ||||||||||| | | |||||||| | Sbjct 191981 TCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGG 191922 Query 111612 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 111671 ||| |||| || | || ||||| || | || ||||| | | || ||| |||| Sbjct 191921 CGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGT 191862 Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTA 111725 ||||||||||||| |||| || | | || | | ||| ||| | || | | Sbjct 191861 GCCATGGCTCAAGGTAGATGGCAAAGGCACC---TGGGCGCTTGTTGCCACCCTGGTCGA 191805 Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 111785 | ||||| || ||| ||| |||| || ||||| ||||| | ||| | |||| || | Sbjct 191804 CGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGT 191745 Query 111786 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 111845 | || || | ||| || |||| | | |||| || | |||||||| | Sbjct 191744 TGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAGACCAATACCGC 191685 Query 111846 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 111905 |||| ||| ||||| || || | | || || | ||||| |||| ||| || Sbjct 191684 CAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATGCTGT 191625 Query 111906 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 111965 | ||||| || |||| |||||||| ||||||||| ||| |||||| || || |||| Sbjct 191624 CTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGA 191565 Query 111966 AGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAG 112024 | |||||||| | ||||| | || ||| ||| ||||| | |||||| ||||| | | Sbjct 191564 ACAGGGTTGGCGAGGCGTGTGT-AAAGTACTTTTGCGACATGTAGTCGTAAGTCTCAATG 191506 Query 112025 ACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 | |||||||| || ||||| ||||||| || || ||||||| ||||| |||||| Sbjct 191505 GCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTGTGGG 191446 >seq403 Length=285126 Score = 149 bits (164), Expect = 8e-31 Identities = 309/455 (68%), Gaps = 14/455 (3%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| || || |||||||| |||||||||||||| ||| |||| ||||| ||||| Sbjct 107405 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATG 107464 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AAT--GGGTGGCACCCCAACTTGTTTGAGGAG 122486 ||||| || || || | ||||| | | | |||| || | | | | ||| || Sbjct 107465 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGC-CGAGAGCAAG---GAGCAG 107520 Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546 ||| || | || |||||||||||| | |||| | |||||| |||| || Sbjct 107521 ACGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGC 107580 Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 122606 || || || ||||| || |||| | | ||||||||| || || || | | ||| || Sbjct 107581 GCAAGGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATAGC 107640 Query 122607 GTGGATAGTTTCGGTAGTGGGTC---TATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 122663 | || || | | |||| | | || | | || ||||||| |||||| Sbjct 107641 CTCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAGAGA---GAAGAGCAGGCAGGCAAA 107697 Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723 || ||| | |||||| || || || || || || || |||||| ||||| ||||| Sbjct 107698 GTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCAT 107757 Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783 |||||| |||||||||||||| | || | | |||||| ||| ||||||||||||||| Sbjct 107758 GAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATACCCTC 107817 Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || |||||||| | ||| || | ||| |||| Sbjct 107818 AACGGCGGCAAACGCGACAAGACGGTTGGCAAAGG 107852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028749934400