Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq393 284 1e-71 seq403 158 1e-33 >seq393 Length=255347 Score = 284 bits (314), Expect = 1e-71 Identities = 1126/1746 (64%), Gaps = 47/1746 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| |||||||| || || ||||||| || | ||||| || | Sbjct 193170 CGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCGACGTG 193111 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||| || | |||| || ||||| ||||| || ||||| ||| Sbjct 193110 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGACTGGTCGATAAAG 193051 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTCC 118014 || || || || ||||| || || | | || | | ||||||||| |||||| Sbjct 193050 GCACCACGGTCGGCAGCCATCTCGATGA--TTCTGCGCTGCGAGATTTCCCAAACAGTCT 192993 Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074 |||| || | ||| | ||||| ||||||| || | ||||| |||||| | Sbjct 192992 TGTAAAGCTCCTTGGTCTCATCGGGGATATTGGGAATTCGTGCAATGGAACCACCCTCGG 192933 Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134 || ||| | | |||||| | || ||||| || || || | || |||| | | Sbjct 192932 CGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGAGCA 192873 Query 118135 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGG 118191 | ||| | |||| || |||||||| ||||| || | ||| || || |||| Sbjct 192872 GCCATGGGT--TGACCACCTGGAACTCACCAGCGAGCACACGGCG-AGAGTAAATGTTGG 192816 Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 118251 ||||||||||| |||||||| ||||| || | || || | |||||||| || |||| Sbjct 192815 AAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCA 192756 Query 118252 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGT 118311 ||||||| ||||| || ||| |||| ||| | | ||| ||||||| | | Sbjct 192755 TGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCTCAT 192696 Query 118312 CCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 118367 ||||||| || || | | |||| || |||||| || ||||||| || || Sbjct 192695 CCCAGTCCCAG-AGATCGGTAGGGGTCT---TCTCCCACATGTCGTACTGGAGAATGCCC 192640 Query 118368 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAAT-TCG 118424 | ||| | || |||||||| | ||||| || || | ||| ||| | |||| ||| Sbjct 192639 TTGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGGAC---CAAGTTCCTTGGCAATATCG 192583 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 || || || || ||||| || || || || || || || || | |||| Sbjct 192582 CAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTG 192523 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 |||| || ||| || || | || || | || |||| || ||||| || ||| Sbjct 192522 GCCTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACA 192463 Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC--CGAGCGGTCTCCACGGGATAAA 118602 || | ||||| || || || | | || || | || || ||| ||||| || Sbjct 192462 CCCATACCAATAGGTCGGTGGCGGAAGTT--GCTGCGGCGCGCCTCCTCAACGGGGTAGT 192405 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 || || |||| | | || | || |||||| || | || | || || |||| Sbjct 192404 GGTTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCT 192345 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 118722 ||| | ||||| || || | | |||| | ||| || |||| || |||| Sbjct 192344 TTTGAAAGTCAAACTCGCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCA 192285 Query 118723 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTG 118782 | || || |||| | |||||| | |||||||||| | ||| || ||||| | ||| | Sbjct 192284 GGTTGCAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGG 192225 Query 118783 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 118842 | || ||||||||||| |||||| || || ||| ||| || ||||||||||| | Sbjct 192224 AGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGA 192165 Query 118843 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCA 118901 |||| | || | || ||||| || || | || || ||||| | ||| | | || | Sbjct 192164 GCATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTG-G 192106 Query 118902 GCTGGCACAGTGGCGTTG-GCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAA 118960 || | || || || | || | ||| |||||| | ||| || ||||| || Sbjct 192105 GCGCGAACCGTCTCGCGGCCCTTGTTTTGCTT-CTCGTAGCTCTCGTACAGCGCTTCGAA 192047 Query 118961 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 119020 ||| || || | | || | || || || || | ||||| | || | ||| | Sbjct 192046 CTCGTCGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATC 191987 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080 || ||| | || ||||||||||| | ||| || ||||| || || |||||||||| Sbjct 191986 GCCGTTCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATC 191927 Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 || |||| | || || | || || || |||| |||| ||| | | || ||| Sbjct 191926 GCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATC 191867 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTG 119194 |||||||| || || ||||| | || | | | ||| | || ||| |||| Sbjct 191866 AGCGTGCCATGGCTCAAGGTAGATGGC-AAAGGCACCT--GGGCGCTTGTTGCCACCCTG 191810 Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254 || || || | || ||| ||| ||||||| ||||| ||||||| ||| | ||| Sbjct 191809 GTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGT 191750 Query 119255 GCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312 || || || || | || || ||| | |||| | || ||||| || | |||| Sbjct 191749 TCCGTTGGTGCCGCCAATGTAGGAGCC--GGTGGCACGGATTCGGTGGACGTTGAGACCA 191692 Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372 ||||| || || ||| ||||| ||||| | |||| || ||||||| || ||| Sbjct 191691 ATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCG 191632 Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCA 119432 || ||| |||| | |||||||||||||| ||||| || || ||||| || Sbjct 191631 ATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCT 191572 Query 119433 GCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTGTCGTAGGT 119491 |||||||| || ||||| | ||||| | || ||| ||| ||||| | |||||| || Sbjct 191571 GCGTTGAACAGGGTTGGCGAGGCGTGTGT-AAAGTACTTTTGCGACATGTAGTCGTAAGT 191513 Query 119492 CTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTA 119551 ||| | | | |||||| || ||||| || |||| | || ||||| | ||||| Sbjct 191512 CTCAATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTG 191453 Query 119552 TTGGGG 119557 ||| || Sbjct 191452 TTGTGG 191447 >seq403 Length=285126 Score = 158 bits (174), Expect = 1e-33 Identities = 311/454 (69%), Gaps = 12/454 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 ||||| ||||| ||||||||||||||||| ||||| || | |||| ||| |||||||| Sbjct 107405 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC-AAGCGAGATGTTCTCCAT 107463 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGCTGGCACTCCAATCTGTTTGAGGAGA 129844 || || || ||||| | | ||| | | ||| || || | ||| ||| Sbjct 107464 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTG--GGGTTGCCGAGAGCAAGGAGCAGA 107521 Query 129845 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTA 129904 || || | |||| |||||||||||| |||| || |||||| |||| || Sbjct 107522 CGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGCG 107581 Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 || || |||||||| || |||| ||| |||||| || |||||||| | ||| || Sbjct 107582 CAAGGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATAGCC 107641 Query 129965 TGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 130021 | | | || ||| || | | ||| | | || |||||| |||||| Sbjct 107642 TCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAGAGA---GAAGAGCAGGCAGGCAAAG 107698 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || ||| | |||||||||||| |||||||| || || |||||| ||||| |||||| Sbjct 107699 TCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATG 107758 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 ||||| ||||||||||||||||| || | ||||| || ||||||||| ||||| Sbjct 107759 AGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATACCCTCA 107818 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || || ||||| | ||||| | ||||||| Sbjct 107819 ACGGCGGCAAACGCGACAAGACGGTTGGCAAAGG 107852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431999597840