Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq393 273 2e-68
seq403 86.0 7e-12
>seq393
Length=255347
Score = 273 bits (302), Expect = 2e-68
Identities = 525/763 (69%), Gaps = 22/763 (3%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||||| || ||| | || || ||||| || ||| | | | | | |||||| |||
Sbjct 191460 TCATGCGAGTTGCCGTCGGCATACACGGCGATGACATTGAAAAG-GCCATTGAGACTTAC 191518
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||| ||| |||||||||||||| |||||| ||||||||||||||||||| || ||
Sbjct 191519 GACTACATGTCGCAAAAGTACTTTACACACGCCTCGCCAACCCTGTTCAACGCAGGCACA 191578
Query 53312 A-ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370
||||||| |||||||| ||||||||| | | |||||||| ||| ||||||||
Sbjct 191579 CCATCACCC-CAGATGTCCTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATCGACGG 191637
Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430
||||||||| || |||||| || || ||||||||| | || ||||| ||| |
Sbjct 191638 CATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCGCTGGCGGTATTGGTCT 191697
Query 53431 CCACTGCT--CGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| || | |||| ||||||| | |||| | || || || ||||| |
Sbjct 191698 CAACGTCCACCGAA--TCCGTGCCACCGGCTCCTACATTGGCGGCACCAACGGAACATCA 191755
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || || | || |||||||| || | ||||||||| || || |||||| ||||||||
Sbjct 191756 AACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACGTCGACCAGGGT 191815
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
|| |||||| || | || ||||||||||| ||||| |||||||| || | |
Sbjct 191816 GGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTCTTT 191875
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT- 53667
| || || || ||||| ||| || || | || ||| | ||| ||| || || ||
Sbjct 191876 GGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTTCGCGCCCGCGATCTCTTC 191935
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
||| |||||||||||||| ||| | |||||| | || | || ||| || |||
Sbjct 191936 TAC-GCTCTGTGGATTCCCGACTTGTTCATGAAGCGTGTCCAAGAGAACGGCGATTGGAC 191994
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGA 53787
|||||||||||| ||||||||||| || || | ||||||||| || ||||| | |
Sbjct 191995 CCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTCTACGGCGACGAGTTCGAAGC 192054
Query 53788 GATGTATCGGACGTAC-----GCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCG 53841
| |||| || ||| ||| | |||||||| ||| ||| || |
Sbjct 192055 GCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCCGC------GAGACGGTTCGCGCCCA 192108
Query 53842 TGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTA 53901
|| | ||| |||| ||||| || ||| ||||| || | || | ||| |||
Sbjct 192109 GAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGTAACCCCTTTATGCTCTA 192168
Query 53902 CAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
||||||| | |||| |||||||||||||||||| | |||
Sbjct 192169 CAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGC 192211
Score = 129 bits (142), Expect = 6e-25
Identities = 301/447 (67%), Gaps = 9/447 (2%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| |||||| | || || |||||||| || || || | ||||| | || |||
Sbjct 192731 CGCAACTCGCTGCTCATCGCACCCATGCCAACTGCCTCCACCTCGCAGATTCTCGGAAAC 192790
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| ||||||| ||| ||||| || || ||||||
Sbjct 192791 AACGAGTGCTTCGAGCCATACACTTCCAACATTTACTCTCGCCGTGTGCTCGCTGGTGAG 192850
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| || ||||| || |||||||||| | || | |||| |
Sbjct 192851 TTCCAGGTGGTCAACCCATGGCTGCTCAAGGACCTTGTCGACATGGGCCTGTGGTCTGAG 192910
Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTC-CA-GAATCTGGAGATTCC 55719
| || |||| || || | || | || || ||| | || |||| | |||
Sbjct 192911 AACATGAAGAACCGCATCATCGCCG--AGGGTGGTTCCATTGCACGAATTCCCAATATCC 192968
Query 55720 TC--TGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATT 55777
| || | | ||||||| ||||| ||| || ||||| || | ||| || | ||
Sbjct 192969 CCGATGAGAC-CAAGGAGCTTTACAAGACTGTTTGGGAAATCTCGCAGCGCAGAATCATC 193027
Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG 55837
|| ||| ||| || |||||||| | ||||||||||||||||| |||||||| ||||
Sbjct 193028 GAGATGGCTGCCGACCGTGGTGCCTTTATCGACCAGTCCCAGTCGTTGAACATCCACATG 193087
Query 55838 GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897
|| | ||| | ||| |||| | | |||||||||||| || |||||| || ||
Sbjct 193088 AAGGAGCCTACCATGGGCAAGATCACGTCGATGCACTTTGCTGGATGGAAGCTTGGTCTT 193147
Query 55898 AAGACGGGTATGTACTATCTGCGGACC 55924
|||||||| |||||||| || || |||
Sbjct 193148 AAGACGGGCATGTACTACCTCCGTACC 193174
>seq403
Length=285126
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849
|| || || || | ||| || ||||| || ||||||||||||||||| ||||||| |
Sbjct 107732 TCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCG 107791
Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCG 74899
|| ||||| ||||||||||| || || || ||||| |||||||| ||
Sbjct 107792 AATGAACCGCTGAAGAAGATACCCTCAACGGCGGCAAACGCGACAAGACG 107841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547213168157200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |