Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq393 273 2e-68 seq403 86.0 7e-12 >seq393 Length=255347 Score = 273 bits (302), Expect = 2e-68 Identities = 525/763 (69%), Gaps = 22/763 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || ||| | || || ||||| || ||| | | | | | |||||| ||| Sbjct 191460 TCATGCGAGTTGCCGTCGGCATACACGGCGATGACATTGAAAAG-GCCATTGAGACTTAC 191518 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||| ||| |||||||||||||| |||||| ||||||||||||||||||| || || Sbjct 191519 GACTACATGTCGCAAAAGTACTTTACACACGCCTCGCCAACCCTGTTCAACGCAGGCACA 191578 Query 53312 A-ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 ||||||| |||||||| ||||||||| | | |||||||| ||| |||||||| Sbjct 191579 CCATCACCC-CAGATGTCCTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATCGACGG 191637 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 ||||||||| || |||||| || || ||||||||| | || ||||| ||| | Sbjct 191638 CATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCGCTGGCGGTATTGGTCT 191697 Query 53431 CCACTGCT--CGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 | || | |||| ||||||| | |||| | || || || ||||| | Sbjct 191698 CAACGTCCACCGAA--TCCGTGCCACCGGCTCCTACATTGGCGGCACCAACGGAACATCA 191755 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || || | || |||||||| || | ||||||||| || || |||||| |||||||| Sbjct 191756 AACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACGTCGACCAGGGT 191815 Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 || |||||| || | || ||||||||||| ||||| |||||||| || | | Sbjct 191816 GGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTCTTT 191875 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT- 53667 | || || || ||||| ||| || || | || ||| | ||| ||| || || || Sbjct 191876 GGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTTCGCGCCCGCGATCTCTTC 191935 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727 ||| |||||||||||||| ||| | |||||| | || | || ||| || ||| Sbjct 191936 TAC-GCTCTGTGGATTCCCGACTTGTTCATGAAGCGTGTCCAAGAGAACGGCGATTGGAC 191994 Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGA 53787 |||||||||||| ||||||||||| || || | ||||||||| || ||||| | | Sbjct 191995 CCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTCTACGGCGACGAGTTCGAAGC 192054 Query 53788 GATGTATCGGACGTAC-----GCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCG 53841 | |||| || ||| ||| | |||||||| ||| ||| || | Sbjct 192055 GCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCCGC------GAGACGGTTCGCGCCCA 192108 Query 53842 TGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTA 53901 || | ||| |||| ||||| || ||| ||||| || | || | ||| ||| Sbjct 192109 GAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGTAACCCCTTTATGCTCTA 192168 Query 53902 CAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 ||||||| | |||| |||||||||||||||||| | ||| Sbjct 192169 CAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGC 192211 Score = 129 bits (142), Expect = 6e-25 Identities = 301/447 (67%), Gaps = 9/447 (2%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| |||||| | || || |||||||| || || || | ||||| | || ||| Sbjct 192731 CGCAACTCGCTGCTCATCGCACCCATGCCAACTGCCTCCACCTCGCAGATTCTCGGAAAC 192790 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| ||||||| ||| ||||| || || |||||| Sbjct 192791 AACGAGTGCTTCGAGCCATACACTTCCAACATTTACTCTCGCCGTGTGCTCGCTGGTGAG 192850 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || || ||||| || |||||||||| | || | |||| | Sbjct 192851 TTCCAGGTGGTCAACCCATGGCTGCTCAAGGACCTTGTCGACATGGGCCTGTGGTCTGAG 192910 Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTC-CA-GAATCTGGAGATTCC 55719 | || |||| || || | || | || || ||| | || |||| | ||| Sbjct 192911 AACATGAAGAACCGCATCATCGCCG--AGGGTGGTTCCATTGCACGAATTCCCAATATCC 192968 Query 55720 TC--TGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATT 55777 | || | | ||||||| ||||| ||| || ||||| || | ||| || | || Sbjct 192969 CCGATGAGAC-CAAGGAGCTTTACAAGACTGTTTGGGAAATCTCGCAGCGCAGAATCATC 193027 Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG 55837 || ||| ||| || |||||||| | ||||||||||||||||| |||||||| |||| Sbjct 193028 GAGATGGCTGCCGACCGTGGTGCCTTTATCGACCAGTCCCAGTCGTTGAACATCCACATG 193087 Query 55838 GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897 || | ||| | ||| |||| | | |||||||||||| || |||||| || || Sbjct 193088 AAGGAGCCTACCATGGGCAAGATCACGTCGATGCACTTTGCTGGATGGAAGCTTGGTCTT 193147 Query 55898 AAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| |||||||| || || ||| Sbjct 193148 AAGACGGGCATGTACTACCTCCGTACC 193174 >seq403 Length=285126 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || || || | ||| || ||||| || ||||||||||||||||| ||||||| | Sbjct 107732 TCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCG 107791 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCG 74899 || ||||| ||||||||||| || || || ||||| |||||||| || Sbjct 107792 AATGAACCGCTGAAGAAGATACCCTCAACGGCGGCAAACGCGACAAGACG 107841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213168157200