Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq393 255 7e-63 seq225 176 5e-39 seq178 116 4e-21 seq385 104 3e-17 >seq393 Length=255347 Score = 255 bits (282), Expect = 7e-63 Identities = 925/1429 (65%), Gaps = 44/1429 (3%) Strand=Plus/Minus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414 ||||| || ||||| || || ||| || | ||| | |||||| ||||| || ||| Sbjct 192852 AACTCACCAGCGAGCACACGGCG-AGAGTAAATGTTGGAAGTGTATGGCTCGAAGCACTC 192794 Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474 |||||||||||| ||||| | ||| || || ||||| || ||| | ||| || || Sbjct 192793 GTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCGATGAGCAGCGAGTT 192734 Query 80475 CCGCAGGCCGTGCT------TCTTGATATCCTCGCGCAAATCTGA---CCAAAAATCAAC 80525 || | ||||||| ||||| ||| | || ||| | ||| | ||| Sbjct 192733 GCGGACACCGTGCTGGGCAATCTTGG---CCTTGAGCTCATCCCAGTCCCAGAGATCGGT 192677 Query 80526 CCCAACGCTGTGACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGC 80585 | | | | |||||||||||| ||| | ||||||| || | ||||| ||| | Sbjct 192676 ---AGGGGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTGGAGACAGGAGATCCCTC 192620 Query 80586 GAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTG 80645 | | |||||||| || || |||||| | || || ||| | || || ||||| Sbjct 192619 GTAGGTCTCGTAAGGACCAAGTTCCTTGGCAATATCGCAGGACGAAGTCAGAGCGGCGTG 192560 Query 80646 ATAAATGCACTCAAAGACGCCCTTGTTCA-CACCGCGCGCCTG-TGGGTCGTCGAACGAC 80703 || ||| ||| |||| |||| | | | | ||||| | || | ||||| | | Sbjct 192559 GTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTG-GCCTGGTTGGAC-TCGAAGGGC 192502 Query 80704 AAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGG 80763 | || || | ||| | || ||||| ||||| || || || | || || |||||| Sbjct 192501 AGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACCCATACCAATAGGTCGGTGG 192442 Query 80764 CGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTC 80823 || ||| || |||||| || ||||| ||| || || | |||| Sbjct 192441 CGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAATAATCTTGTTC 192382 Query 80824 AGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCC 80883 | |||||| || || || | ||||| || || || || |||||||| || | | | | Sbjct 192381 AAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTTTGAAAGTCAAACTCGCCGCGC 192322 Query 80884 TTC------ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA 80937 || ||||||| || || || || ||||| ||||| || || ||||| ||| Sbjct 192321 TTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCA 192262 Query 80938 GCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTT 80997 | | | || ||||||| || || ||||| | || || ||| || |||||||| Sbjct 192261 GGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTGCCCAGGTTC 192202 Query 80998 TTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCG 81057 |||||||| |||| ||||||||| ||||||||| ||| | ||| |||| ||||| Sbjct 192201 TTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCA 192142 Query 81058 ACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTG 81117 ||| | || ||||| || | ||| | || | || ||| || |||| ||| Sbjct 192141 GTCTGAGCCTCAAGGATAGCATACCACAGCTTCTGGGCGCGAACCGTCTCGCGGCCCTTG 192082 Query 81118 CCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAG 81176 || | | || | |||| ||| | ||||||| | | |||| | || | || Sbjct 192081 TTTTGCTTCTCGTAGCTCTCGTACAGCG-CTTCGAACTCGTCGCCGTAGACATCGGCAAG 192023 Query 81177 GTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCT---ACAGCCTT 81233 | ||||||||||| |||||||||||| ||| ||| |||||||| ||| ||| Sbjct 192022 ACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGC---CGTTCTCTTGGACACGCTT 191966 Query 81234 CATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATC 81293 |||||| ||| || ||||| || ||| ||| || |||||| ||| ||||||| | Sbjct 191965 CATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTT 191906 Query 81294 ACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATA 81353 || ||||| ||||| || || ||| | | || || || ||||||||||| || || Sbjct 191905 TCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTA 191846 Query 81354 CACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTT 81410 | ||| | | || ||| ||||||||||| |||||| || || || ||| Sbjct 191845 GATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTT 191786 Query 81411 AAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGA 81470 ||||||| | ||| || |||| ||| | ||| ||||| || || | || || Sbjct 191785 GTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGA 191726 Query 81471 CCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATC 81528 || |||| || | | || ||| ||||| || || || | ||| || ||| Sbjct 191725 GCCGGTGGCACGGATTCGGTGGACGTTG--AGACCAATACCGCCAGCGGTCTTGGAGATC 191668 Query 81529 TGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGC 81588 ||| || || | || || || || || |||||||| |||| |||||||| | Sbjct 191667 AAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATG 191608 Query 81589 AAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCG 81648 | ||| ||| |||||||| || | || ||| || |||||||| ||||| | ||| Sbjct 191607 AGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCG 191548 Query 81649 TGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCA 81708 || | || || | ||||| ||| || || || || | | ||| || || Sbjct 191547 TGTGTAAAGTACTTTTGCGACATGTAGTCGTAAGTCTCAATGGCCTTTTCAATGTCATCG 191488 Query 81709 CCGTGAATACCGATAGCTACACGCATAAACATGTACTG-GGGCGTCTCG 81756 ||||| || |||| || || ||||| | ||||| || ||||| |||| Sbjct 191487 CCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTGTGGGCG-CTCG 191440 >seq225 Length=197037 Score = 176 bits (194), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || ||||||||||| || | || |||||||| Sbjct 138463 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACTATCACGTTGGAAGTTGAGTCTTCA 138522 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || ||||||||||||||||| || ||||| ||||| Sbjct 138523 GACACGATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAA 138582 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||||||||| ||||| || | ||||| || ||| ||||| || Sbjct 138583 CAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAAGACGGCCGTACTCTGAGC-GACTACAA 138641 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| ||||| || ||||| ||| | ||||| || |||||| Sbjct 138642 CATCCAGAAGGAGTCCACCCTGCATCTTGTCCTCCGTCTCCGTGGTGGA 138690 Score = 159 bits (176), Expect = 4e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| |||||||| || || || ||||| || || | ||||| || || | Sbjct 138690 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCTTGGAGGTGGAATCCAG 138749 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | ||| | || || || ||||||||||| || ||||| ||||| Sbjct 138750 CGACACCATCGACAACGTAAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 138809 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| || ||||||||||||||||| || || | || ||||| ||||||| || Sbjct 138810 GCAACGTCTCATCTTTGCTGGTAAGCAACTTGAAGACGGACGGACCCTCTCAGACTACAA 138869 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || ||| | || | ||||| || |||||||| Sbjct 138870 CATCCAGAAGGAGTCTACACTCCATTTGGTGCTCCGTCTACGTGGTGGACA 138920 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || ||||| || ||||| || | ||||| || | ||| | Sbjct 138259 ACCGGCAAGACCATCACGCTTGAAGTCGAGTCGTCCGACACCATTGACAACGTCAAGTCG 138318 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| ||||||||||| ||||| || || |||||||| || ||||| || || ||| Sbjct 138319 AAGATTCAAGACAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAAAG 138378 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||||| || ||||| | ||||| || | || ||||| ||||| || ||| Sbjct 138379 CAACTCGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTGCAT 138438 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| |||| || |||||||| Sbjct 138439 CTCGTCCTGCGCCTGCGCGGTGG 138461 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || |||||||| ||||| || | ||| | ||| | ||| Sbjct 137976 ACCGGCAAGACGATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGAGC 138035 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| ||||| ||||||||||| || | || || || || ||| Sbjct 138036 AAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAACGCTTGATCTTCGCCGGCAAG 138095 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| || ||||| | ||||| || |||| ||||| ||||| || ||| Sbjct 138096 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTGCAT 138155 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || || || Sbjct 138156 CTTGTCCTCCGCCTCCGTGGAGG 138178 >seq178 Length=462551 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||| | || || |||||||||||||| ||||| || ||||| |||||| | || || || Sbjct 349993 AAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGTTTGATCTTCGCC 349934 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || |||||||||||||||| || ||||| | ||||| || |||| ||||| || || Sbjct 349933 GGAAAGCAACTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACA 349874 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || ||| | ||||| || ||||| Sbjct 349873 CTCCACCTGGTCCTCCGTCTCCGTGGTGG 349845 >seq385 Length=1101030 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || |||||||||||||| || || || || |||||||||||| Sbjct 327474 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAACTCGAG 327415 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| || || || || | ||| | Sbjct 327414 GACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTC 327355 Query 27619 CGTCTTCGCGGTGGA 27633 || || || |||||| Sbjct 327354 CGCCTGCGTGGTGGA 327340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307448643680