Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq225 95.1 1e-14
>seq225
Length=197037
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||||||| || || ||| || || || || || || | || || ||| |||| ||
Sbjct 138900 CACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCGTCTTC 138841
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||| || || || ||||| || ||||| |||||||| | || | || ||| |||||
Sbjct 138840 AAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTG 138781
Query 39195 GATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || || | ||| | | | || ||||| || ||||| |||| ||||| | |
Sbjct 138780 GATCTTGGACTTTA-CGTTGTCGATGGTGTCGCTGGATTCCACCTCCAAGGTGATGGTCT 138722
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| || || || || || |||||||||||
Sbjct 138721 TTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543432673982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |