Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq189 84.2 2e-11
>seq189
Length=186598
Score = 84.2 bits (92), Expect = 2e-11
Identities = 131/181 (72%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 53493 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-C 53551
|||||||||| | |||||| ||| | ||| | || || ||||||||||| || |
Sbjct 82086 TCGTCAAGGTTCGTACAAGGACCACCAAGGTGCCACAAATCGGTGACAAGTTTGCGTCTC 82027
Query 53552 TTCACGGCGCAAAAGGGGAC-ATGCGGAGCGGTCCTGACTC-AGGAGGACATGCCCTTCG 53609
|||||| |||||||| || || | | | ||| | | |||| ||||||||||||
Sbjct 82026 GTCACGGT-CAAAAGGGTACGATTGGTATCA--CCTACCGCCAGGAAGACATGCCCTTCT 81970
Query 53610 ACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 53669
|| ||| || | |||||| | |||||||||||||||||| ||||||| | ||||
Sbjct 81969 CCAGGGAAGGTCTCACACCCGACTTGATCATCAACCCCCACGCCATTCCCTCGCGTATGA 81910
Query 53670 C 53670
|
Sbjct 81909 C 81909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406161150652804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |