Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq171 107 1e-18 seq189 98.7 7e-16 >seq171 Length=1567143 Score = 107 bits (118), Expect = 1e-18 Identities = 188/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 27453 CAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGT-GTACTCTGCTCCGA 27511 ||||||||| || ||| ||| ||| ||| || |||| || | ||||||||| |||| Sbjct 618398 CAGCTGATCGACGCCCTGGCCCTCGTAATCTGCCG-CATGCCCTTTGTACTCTGCGCCGA 618340 Query 27512 AATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 27571 |||||| ||||||||| ||||| || || ||||| || ||| || |||| || || Sbjct 618339 AATGCCGCCATTGGAAACCGTATACGGGGCCCAGCTCGCCCGTCTCGTAGTGCGAGAGGC 618280 Query 27572 CCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGG 27631 || |||| | | | || | | |||||| ||||||||||||| | |||| || | Sbjct 618279 CCACGCTGTCGAGATACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGATCCCCGCGTCTG 618220 Query 27632 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 27691 ||||| | || ||| || ||||||||| || ||||| | | ||||| Sbjct 618219 AGAGCGGCCCGCTGTGCGTGCTTCCGGCGACGAACCAGAGAAGCTCGCCGATTACGGCGC 618160 Query 27692 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | || |||| ||| || ||||||||||| Sbjct 618159 GCAGGAATACCCGCTTCGTGGTGAGGAGGGG 618129 >seq189 Length=186598 Score = 98.7 bits (108), Expect = 7e-16 Identities = 133/180 (74%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 48509 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-C 48567 |||||||||| | |||||| ||| | ||| | || ||||||||||||||||| | Sbjct 82086 TCGTCAAGGTTCGTACAAGGACCACCAAGGTGCCACAAATCGGTGACAAGTTTGCGTCTC 82027 Query 48568 TTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGAC-CCAGGAGGACATGCCCTTCGA 48626 |||||| |||||||| || ||| | ||| | |||||| |||||||||||| Sbjct 82026 GTCACGGT-CAAAAGGGTACGATTGGTATCA-CCTACCGCCAGGAAGACATGCCCTTCTC 81969 Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686 || ||| || | |||||| | |||||||||||||||||| ||||||| | ||||| Sbjct 81968 CAGGGAAGGTCTCACACCCGACTTGATCATCAACCCCCACGCCATTCCCTCGCGTATGAC 81909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505335605234