Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq225 134 3e-26
>seq225
Length=197037
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||||||||| || || ||||| || ||||||||||| ||| | ||| |
Sbjct 138681 GAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACG 138622
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || || |||||||| || | ||| ||||||| | ||| || ||
Sbjct 138621 GCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTC 138562
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || |||||| | || | |||||||| ||| ||||| | ||
Sbjct 138561 CTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAACTTCCAACGT 138502
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| || || ||||| ||||||| ||||||
Sbjct 138501 GATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463
Score = 107 bits (118), Expect = 4e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||||||||| || || ||||| || ||||||||||| |||| | || |
Sbjct 138170 GAGGCGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 138111
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
||||| || || || ||||||||||| |||| | |||||||| | | || || |
Sbjct 138110 GCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGT-TGCTGGTCTGGGGGAATGCCCT 138052
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || ||||| || |||||| | || | | |||| ||| ||| || ||||| |
Sbjct 138051 CCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGG 137992
Query 152065 TAATAGTTTTGCCCGTGA 152082
| || || ||||| ||||
Sbjct 137991 TGATCGTCTTGCCGGTGA 137974
Score = 87.8 bits (96), Expect = 4e-12
Identities = 151/216 (70%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| || |||||||| || ||||||||||| || | | || | || ||
Sbjct 138903 GAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCGTC 138844
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || || || ||||| || | |||||||||| | ||| || ||||| ||
Sbjct 138843 TTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTC 138784
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069
||| || || || || | || | | ||| ||| | || | || |||| || ||
Sbjct 138783 TTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTC-CACCTCCAAG-GTGATG 138726
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || ||||||||||| ||||||| ||||||
Sbjct 138725 GTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 138690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153814679701794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |