Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq225 134 3e-26 >seq225 Length=197037 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| || || ||||| || ||||||||||| ||| | ||| | Sbjct 138681 GAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACG 138622 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || |||||||| || | ||| ||||||| | ||| || || Sbjct 138621 GCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTC 138562 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || |||||| | || | |||||||| ||| ||||| | || Sbjct 138561 CTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAACTTCCAACGT 138502 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || || ||||| ||||||| |||||| Sbjct 138501 GATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| || || ||||| || ||||||||||| |||| | || | Sbjct 138170 GAGGCGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 138111 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| || || || ||||||||||| |||| | |||||||| | | || || | Sbjct 138110 GCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGT-TGCTGGTCTGGGGGAATGCCCT 138052 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || ||||| || |||||| | || | | |||| ||| ||| || ||||| | Sbjct 138051 CCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGG 137992 Query 152065 TAATAGTTTTGCCCGTGA 152082 | || || ||||| |||| Sbjct 137991 TGATCGTCTTGCCGGTGA 137974 Score = 87.8 bits (96), Expect = 4e-12 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| || |||||||| || ||||||||||| || | | || | || || Sbjct 138903 GAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCGTC 138844 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || || ||||| || | |||||||||| | ||| || ||||| || Sbjct 138843 TTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTC 138784 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069 ||| || || || || | || | | ||| ||| | || | || |||| || || Sbjct 138783 TTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTC-CACCTCCAAG-GTGATG 138726 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||||||||| ||||||| |||||| Sbjct 138725 GTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 138690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814679701794