Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq225 150 4e-31 seq178 134 3e-26 seq403 118 2e-21 seq385 109 1e-18 >seq225 Length=197037 Score = 150 bits (166), Expect = 4e-31 Identities = 158/205 (77%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| ||||| || || ||||| | ||| || || |||||||||||||| | Sbjct 138179 ACCTCCACGGAGGCGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 138120 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| |||||||| ||||| ||||| || Sbjct 138119 CAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGG 138060 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| || ||||| ||| || || | ||||| ||||| |||| || | Sbjct 138059 AATGCCCTCCTTGTCCTGAATCTT-GCTCTTGACATTGTCGATGGTGTCGGAAGACTCCA 138001 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | || || ||||||||||| || || Sbjct 138000 CCTCAAGGGTGATCGTCTTGCCGGT 137976 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||||||| || || ||||| | ||| || || || ||||||||||| | Sbjct 138462 ACCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 138403 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| ||||| || ||||| || |||| || || || || || Sbjct 138402 CAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGG 138343 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||| ||||| | || ||| | || || ||||| || | ||||| Sbjct 138342 AATGCCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGAC 138283 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 ||| || ||||| ||||| || |||| Sbjct 138282 TTCAAGCGTGATGGTCTTGCCGGTCA 138257 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| | || || || |||||||||||||| | Sbjct 138917 CCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAG 138858 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || ||||| || || |||||||| | |||||| ||||| || Sbjct 138857 AGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGG 138798 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| | |||||| | ||||| ||||| | ||| || Sbjct 138797 ATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACC 138738 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||||| ||||| || || | |||||| ||||| || |||||| Sbjct 138737 TCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 138690 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | ||| || || |||||||||||||| Sbjct 138689 CCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 138630 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || || || || || || ||||| | ||| |||||||| || Sbjct 138629 AGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGG 138570 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| || ||||| | || || | || || ||||| |||| || ||| Sbjct 138569 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAACT 138510 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 138509 TCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463 >seq178 Length=462551 Score = 134 bits (148), Expect = 3e-26 Identities = 116/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | || || || |||||||||||||| | Sbjct 349844 ACCACCACGGAGACGGAGGACCAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGA 349903 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| ||||| || ||||| ||||||||||| |||||||| || Sbjct 349904 AAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCCGGGGG 349963 Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015 ||| ||||||||||| |||||||| Sbjct 349964 AATGCCCTCCTTGTCCTGGATCTT 349987 >seq403 Length=285126 Score = 118 bits (130), Expect = 2e-21 Identities = 175/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| |||| |||| || | | ||| |||||||| | ||||||| |||||||| | Sbjct 107637 ATCATCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCTCAGCGACGCGCTTCCTTGCGCT 107578 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 ||| |||||||||| || ||||||| | || || || || ||||| || || ||| | Sbjct 107577 CTTCTCGGCATGAACGCCACTCTCATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTG 107518 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 || | || || || || || || ||| ||| |||||||||| || |||||| Sbjct 107517 CTCCTTGCTCTCGGCAACCCCAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAG 107458 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 ||| || || || || || ||||||||||| |||||||| | || || |||| | Sbjct 107457 AACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAAG 107398 Query 230403 CCCGGTGT 230410 ||||||| Sbjct 107397 GCCGGTGT 107390 >seq385 Length=1101030 Score = 109 bits (120), Expect = 1e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || |||| || | || || || |||||||||||||| | | Sbjct 327341 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 327400 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| ||||| || ||||| ||||| | ||| || ||||| ||| Sbjct 327401 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 327460 Query 282993 ATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 327461 ATGCCCTCCTTGTCT 327475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733647702756