Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq225 127 1e-24 >seq225 Length=197037 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| || || || |||||| ||||||||||| || | ||| || |||| || Sbjct 138900 CACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCGTCTTC 138841 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| || |||||||| | ||| ||||| || | ||| | || ||||| || Sbjct 138840 AAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTG 138781 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | ||||||||| |||||||||||||| || || ||||| Sbjct 138780 GATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACCTCCAAGGTGATGGTCTT 138721 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| |||||||||||||| Sbjct 138720 TCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691 Score = 109 bits (120), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| ||| || || |||| || Sbjct 138671 ACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCG 138612 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | |||||| || || | ||| | ||| ||||| ||| Sbjct 138611 AGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGA 138552 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | || || || |||| ||| || |||| Sbjct 138551 ATCTTGGACTTGACATTGT--CAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCT 138494 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||||||| |||||||| ||||| Sbjct 138493 TGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463 Score = 105 bits (116), Expect = 5e-18 Identities = 138/189 (73%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| |||| || ||| | || || Sbjct 138160 ACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCA 138101 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| || ||||| |||| || | || ||||| ||| Sbjct 138100 AGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 138041 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||||| || |||||||| | || ||||||| Sbjct 138040 ATCTTGCTCTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCT 137983 Query 44307 TTCCCGTGA 44315 | || |||| Sbjct 137982 TGCCGGTGA 137974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988583623438