Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 149 6e-31 seq15 113 5e-20 seq5 102 8e-17 >seq2 Length=1065396 Score = 149 bits (164), Expect = 6e-31 Identities = 308/453 (68%), Gaps = 4/453 (1%) Strand=Plus/Minus Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 ||||| || ||||| | || ||||| | || | | | |||||| | ||||| Sbjct 669116 AAGGCAGACTGGGCCATCCGATGGATACAAGACAAAAATTCGACCTTCGCACAACGCCTC 669057 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || || || ||||| || ||||| ||||||| ||| ||||| |||| |||||| Sbjct 669056 GTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTCGCTTCCATCTTTTGG 668997 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 || ||||| || ||||||||||| || ||| ||||| ||||| ||||| || | || Sbjct 668996 CTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAACTCATTTCACGTGAT 668937 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 ||||| ||||| |||||||| |||||||| ||| ||| ||| | || || ||| Sbjct 668936 GAGGGGATGCATACTGACTTTGCTTGTTTGCTCTTCTCGCACTTGAGAAACCGCCCCAGC 668877 Query 117224 GCGGC-GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 || || || | || ||||||| || || | ||||||||| || | || Sbjct 668876 CAAGCTGCTATTC-TCGCTATTATCACCGAGGCTGTGACGATCGAGCAGAAATTTTTGAC 668818 Query 117283 CGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341 || || ||||| |||| |||||| || | |||| | | |||| ||||||||||| Sbjct 668817 TGAGGCTCTGCCATGTGC-TCTGCTAGGGATGAATTCCAACTTGATGAAGCAATACATCG 668759 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401 ||||||| || || | ||||| | | ||| | | | || |||||| | || ||| Sbjct 668758 AGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAGAAACACTACCATTCGGCCA 668699 Query 117402 ACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 | || | ||||| ||| | ||||| |||| Sbjct 668698 ATCCTTTCGACTTCATGGAGAGTATCTCATTGG 668666 Score = 123 bits (136), Expect = 3e-23 Identities = 201/286 (70%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || ||||||||||| || || ||||| | || ||| | || || Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||| ||| ||||||| | || | ||||| | || ||| | ||||| Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGATGATGAACGCTACTTCATATCT 669401 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| ||||| || ||||||||||| ||||||||||| ||||| | Sbjct 669400 CATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAGA 669341 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | ||||| ||| | | |||||||| || |||||||| || ||||| || Sbjct 669340 TTCAGCGGA-GAGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGAT 669282 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | || || || | || ||| ||||| || || ||| Sbjct 669281 GGAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTAC 669236 >seq15 Length=722239 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || ||||| || ||| |||| |||||| | | Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || |||| |||| ||| |||| || || ||||| ||||| | ||||| Sbjct 456749 GATACGATTGACAACG-TCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCA 456691 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| || || |||||||| || | || || || |||||||| Sbjct 456690 GCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAA 456631 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| || ||||| | ||| |||| Sbjct 456630 CATCCAGAAGGAGAGTACCCTGCACTTGGTGCTGCG 456595 Score = 113 bits (124), Expect = 5e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || ||||| ||||| ||||||||| | || ||||| | | |||| | Sbjct 457483 TCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCGTCAGACACGATCG 457424 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | | ||| ||| |||| ||||| || || ||||| | ||||||||||| | | Sbjct 457423 ACAATGTGAAGTCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTGA 457364 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 ||| ||| |||||||| || || || | |||||||| |||||||||||||||||| | Sbjct 457363 TCTTCGCCGGCAAACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAG 457304 Query 40880 AGGCCACGCTGCATCTAGTG 40899 | | || || ||||| ||| Sbjct 457303 AATCAACCCTCCATCTGGTG 457284 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| | || || ||| || || Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || || | ||||| ||||| ||||| | |||||| Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| || ||||||||||| || | || || | | |||||||||| Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| ||| |||| Sbjct 456857 ATTCAGAAGGAGAGCACTTTGCA 456835 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || ||||| | || || || | | Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || |||| ||||| || |||||||| | |||||| Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | |||||||| |||||||||| Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||| || | || || || || ||| Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTG 457056 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || || || | | |||| | | | |||| ||||| Sbjct 457762 TCACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACG-TCAAG 457704 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || |||| || || || || || || | |||||||| || | |||| ||| ||| Sbjct 457703 AGCAAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGC 457644 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || |||| || || ||| ||| |||||||||||||| || |||| || Sbjct 457643 AAGCAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTT 457584 Query 40891 CATCTAGT 40898 || || || Sbjct 457583 CACCTTGT 457576 >seq5 Length=849029 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| ||| ||||| | Sbjct 477872 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACAATC 477813 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | || || ||||| || ||| |||| ||||| || | Sbjct 477812 GACAATGTCAAGTCGAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCAGCAGCGTTTA 477753 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | || || || ||||||||||||||||||| Sbjct 477752 ATCTTCGCTGGCAAGCAGCTCGAGGATGGACGGACACTTTCCGACTACAACATCCAGAAG 477693 Query 40879 G 40879 | Sbjct 477692 G 477692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218111599440