Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 6e-31
seq15 113 5e-20
seq5 102 8e-17
>seq2
Length=1065396
Score = 149 bits (164), Expect = 6e-31
Identities = 308/453 (68%), Gaps = 4/453 (1%)
Strand=Plus/Minus
Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043
||||| || ||||| | || ||||| | || | | | |||||| | |||||
Sbjct 669116 AAGGCAGACTGGGCCATCCGATGGATACAAGACAAAAATTCGACCTTCGCACAACGCCTC 669057
Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103
|| || || ||||| || ||||| ||||||| ||| ||||| |||| ||||||
Sbjct 669056 GTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTCGCTTCCATCTTTTGG 668997
Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163
|| ||||| || ||||||||||| || ||| ||||| ||||| ||||| || | ||
Sbjct 668996 CTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAACTCATTTCACGTGAT 668937
Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223
||||| ||||| |||||||| |||||||| ||| ||| ||| | || || |||
Sbjct 668936 GAGGGGATGCATACTGACTTTGCTTGTTTGCTCTTCTCGCACTTGAGAAACCGCCCCAGC 668877
Query 117224 GCGGC-GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282
|| || || | || ||||||| || || | ||||||||| || | ||
Sbjct 668876 CAAGCTGCTATTC-TCGCTATTATCACCGAGGCTGTGACGATCGAGCAGAAATTTTTGAC 668818
Query 117283 CGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341
|| || ||||| |||| |||||| || | |||| | | |||| |||||||||||
Sbjct 668817 TGAGGCTCTGCCATGTGC-TCTGCTAGGGATGAATTCCAACTTGATGAAGCAATACATCG 668759
Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401
||||||| || || | ||||| | | ||| | | | || |||||| | || |||
Sbjct 668758 AGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAGAAACACTACCATTCGGCCA 668699
Query 117402 ACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
| || | ||||| ||| | ||||| ||||
Sbjct 668698 ATCCTTTCGACTTCATGGAGAGTATCTCATTGG 668666
Score = 123 bits (136), Expect = 3e-23
Identities = 201/286 (70%), Gaps = 5/286 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| ||||| || ||||||||||| || || ||||| | || ||| | || ||
Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||| ||| ||||||| | || | ||||| | || ||| | |||||
Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGATGATGAACGCTACTTCATATCT 669401
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || || ||||| ||||| || ||||||||||| ||||||||||| ||||| |
Sbjct 669400 CATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAGA 669341
Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| || | ||||| ||| | | |||||||| || |||||||| || ||||| ||
Sbjct 669340 TTCAGCGGA-GAGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGAT 669282
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||||||| | || || || | || ||| ||||| || || |||
Sbjct 669281 GGAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTAC 669236
>seq15
Length=722239
Score = 113 bits (124), Expect = 5e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || ||||| || ||| |||| |||||| | |
Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | || |||| |||| ||| |||| || || ||||| ||||| | |||||
Sbjct 456749 GATACGATTGACAACG-TCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCA 456691
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| || || |||||||| || | || || || ||||||||
Sbjct 456690 GCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAA 456631
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||| || ||||| | ||| ||||
Sbjct 456630 CATCCAGAAGGAGAGTACCCTGCACTTGGTGCTGCG 456595
Score = 113 bits (124), Expect = 5e-20
Identities = 145/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || ||||| ||||| ||||||||| | || ||||| | | |||| |
Sbjct 457483 TCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCGTCAGACACGATCG 457424
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | | ||| ||| |||| ||||| || || ||||| | ||||||||||| | |
Sbjct 457423 ACAATGTGAAGTCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTGA 457364
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
||| ||| |||||||| || || || | |||||||| |||||||||||||||||| |
Sbjct 457363 TCTTCGCCGGCAAACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAG 457304
Query 40880 AGGCCACGCTGCATCTAGTG 40899
| | || || ||||| |||
Sbjct 457303 AATCAACCCTCCATCTGGTG 457284
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| | || || ||| || ||
Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| || || | ||||| ||||| ||||| | ||||||
Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || ||||||||||| || | || || | | ||||||||||
Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| ||||||||| ||| ||||
Sbjct 456857 ATTCAGAAGGAGAGCACTTTGCA 456835
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || ||||| || || ||||| | || || || | |
Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || |||| ||||| || |||||||| | ||||||
Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| ||||| || || | |||||||| ||||||||||
Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||| || | || || || || |||
Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTG 457056
Score = 89.7 bits (98), Expect = 5e-13
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| ||||||||| | || || || | | |||| | | | |||| |||||
Sbjct 457762 TCACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACG-TCAAG 457704
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| |||| || || || || || || | |||||||| || | |||| ||| |||
Sbjct 457703 AGCAAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGC 457644
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| || || ||| ||| |||||||||||||| || |||| ||
Sbjct 457643 AAGCAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTT 457584
Query 40891 CATCTAGT 40898
|| || ||
Sbjct 457583 CACCTTGT 457576
>seq5
Length=849029
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| | || ||||| ||| ||||| |
Sbjct 477872 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACAATC 477813
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | || || ||||| || ||| |||| ||||| || |
Sbjct 477812 GACAATGTCAAGTCGAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCAGCAGCGTTTA 477753
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| ||||| ||||| || || | || || || |||||||||||||||||||
Sbjct 477752 ATCTTCGCTGGCAAGCAGCTCGAGGATGGACGGACACTTTCCGACTACAACATCCAGAAG 477693
Query 40879 G 40879
|
Sbjct 477692 G 477692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218111599440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |