Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq15 125 8e-24 >seq15 Length=722239 Score = 125 bits (138), Expect = 8e-24 Identities = 172/235 (73%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 ||||| || || | | ||||| |||||| |||| || |||||||| || || ||||| Sbjct 456577 TATTGCCCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAG 456636 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || | ||||| || | || || ||||||||||||||||| || | |||||||||||| Sbjct 456637 TCTGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCT 456696 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCG 43128 | || | | |||||| | | ||| | |||| ||||| ||| | | | ||| || | Sbjct 456697 GGAGGGATACCCTCCTTAT-CTTGAATCTTTGATTTGA-CGTTGTCAATCGTATCAGAAG 456754 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || |||| || || ||||| || || || ||||| || ||||| ||||| Sbjct 456755 ATTCGACCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| ||||||||||| ||||| ||||| || || || || | || || Sbjct 456829 ACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCC 456888 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||| ||||||||||| || | ||||||||||| | || | | ||||||||| | Sbjct 456889 AGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGG 456948 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || ||||| | | | || ||| ||||| || || | ||||| || ||| Sbjct 456949 ATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTG 457008 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || ||||||||||| Sbjct 457009 CCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || ||||| || | ||| || || | || ||||||||||| |||||||| Sbjct 457075 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAG 457134 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || || ||||||||||| | ||| | || ||||||||| ||| | || | || | | Sbjct 457135 ATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC-TGAATCTTCGACTTCACATT 457193 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || ||||| || | ||||| || || ||||| || ||||| || Sbjct 457194 GTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAAC 457253 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 457254 GAAGATCTGCAT 457265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816392035320