Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq57 181 9e-41
seq82 163 3e-35
seq15 116 3e-21
seq2 89.7 5e-13
>seq57
Length=16334
Score = 181 bits (200), Expect = 9e-41
Identities = 355/526 (67%), Gaps = 0/526 (0%)
Strand=Plus/Minus
Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398
|| || || || |||| || | |||||| ||||||| ||| ||| || || ||||||
Sbjct 16297 TTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCG 16238
Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458
|| || || ||||||||| ||||||| | || | ||| || ||||| || ||||||
Sbjct 16237 CGAACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGC 16178
Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518
|| ||||| || || | ||||| || || || | ||| ||||| || || ||||||||
Sbjct 16177 CAAGGCTCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTAT 16118
Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578
| ||| || |||||| |||| | |||||||| |||| ||||||||| | ||
Sbjct 16117 CTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTT 16058
Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638
|| | | |||||| | || || | | ||| | || || ||| || || || |
Sbjct 16057 CCTGAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCG 15998
Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698
| || || ||||| || || |||| |||||||| || || || |||||||| ||
Sbjct 15997 GTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCTTCC 15938
Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758
|| | ||| | ||| || || | | ||||| || ||||| | || ||| ||
Sbjct 15937 TTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGA 15878
Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818
|| || ||| || || || | | || ||||| | || || || ||||| || |
Sbjct 15877 GTGGGTGAGGCATGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCT 15818
Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGT 23864
| || || || ||||| || | | || || ||||| |||||||
Sbjct 15817 TGGATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGT 15772
>seq82
Length=10320
Score = 163 bits (180), Expect = 3e-35
Identities = 673/1051 (64%), Gaps = 36/1051 (3%)
Strand=Plus/Minus
Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202
||||||| || || |||||||||||||| ||||| | ||||||| | || || ||
Sbjct 1234 TGGTGCGTAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCACCCAGCGAAGTGCATGC 1175
Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262
||| | || || | || | ||||| | |||| || ||| |||||| |
Sbjct 1174 TCGTGATCTTGCCCATGGTGGGTTCTTTCATGTGAATGTTGAGAGATTGAGACTGATCAA 1115
Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATG-TACGCATCGACATTTCCCATACG 22321
| ||||| || ||||| |||||||| | | ||||| | ||| || |||||||| ||
Sbjct 1114 TGAACGCGCCACGATCAGCGGCCATCTGAA-CAATGGTGCGCTGAGAGATTTCCCAGACA 1056
Query 22322 GTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCCTCTGGACGGACCCGT 22379
|||||||| || | ||| || || || ||| | || | |||| || ||
Sbjct 1055 GTCTTGTAGAGCGCCTTGAGGTCGGCAGGGAT--ATTGGGAATGTTTTGGATTGAACCAC 998
Query 22380 TATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTT 22439
|| | ||||| || || || |||| ||| | ||| ||| | | ||| |
Sbjct 997 CATCGGCAATGATACGGTTCTTCATGTTATCTGACCATAGACCCATGTCAACAAGATCCT 938
Query 22440 TGACCAGATGAC---GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAA 22496
| |||| | | |||| || ||||| ||||| |||| | ||| ||||| ||| |
Sbjct 937 T---CAGAAGCCAGGGGTTGACGACTTGGAACTCTCCGGCAAGGACACGGCGAGAGTAGA 881
Query 22497 TGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGG 22556
||||||||||| | || ||||| | || ||| |||||| ||| | ||| ||||
Sbjct 880 TGTTGGATGTGTATGGCTCGAAGCACTCGTTGAATCCCAGAATCATACTGGTACTGGCGG 821
Query 22557 TCGGCATCGGCGCCAACAGTAGCGA---GTTTCTCAAGCCGTGCTTTGAAATTTTACTCT 22613
||||||| || | ||||| ||| | ||| || | || ||| || ||| | ||
Sbjct 820 TCGGCATGGGTG-CAACA--AGCAAGCTGTTCCTAACACCATGCGCTGCAATCTCTTCCT 764
Query 22614 TGA--GCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTG 22671
| | ||||| ||| ||||| || || | ||| || ||||| |||||| || || ||
Sbjct 763 TCAATGCATC--CCAATCCCAAAGGTCTGTCGGGGTGACATT---CCACATGTCATACTG 709
Query 22672 CAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGC 22731
|| | ||| || | || || || |||| |||||||| || | || |||
Sbjct 708 CAGAATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGGGCCGAGTTTCTTGGC 649
Query 22732 AAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAA 22791
||| || ||| || || | ||| || |||||||||||||| | | |||||
Sbjct 648 AAGCTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAAGATCTGAATATTCAA 589
Query 22792 ----TTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCA 22847
|||| | |||| || ||| | || | ||||| || ||| ||||| ||||
Sbjct 588 CTGCTTCGCCTGCGGAGA----ATCGAAAGGAAGACGCAGAGCCAGGAATGCGTCAGCCA 533
Query 22848 TACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCA 22907
|||||| || |||| | || || | || | | || | || ||||| || |
Sbjct 532 GACCCTGGACACCTACTGCAATAGGCCTGTGTCGGAAGTTGCTCTTCTTAGCCTCTGGGA 473
Query 22908 AAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNN 22967
|| || ||| |||||| | |||||||||| || ||||| | || |
Sbjct 472 CTGGGTAGTGATTGACATCGATAATCTTGTTCAAGTTCTTGACCACAACCTGGGTGACCT 413
Query 22968 NNNNNNNNNNNTCAAAGTCGTAAACGCC--CGATTGTA-CAACAAACTTGTTGACGGCGA 23024
| ||||| || ||||| || | | |||| || | | ||||
Sbjct 412 CGTGTAGTTTGCCGAAGTCATAGACGCCGTTGACAGCATCAACGAAGGTAGGCAGAGCGA 353
Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTAC 23084
|||| ||||| ||||| || || ||||| ||| || ||||| || || ||||| || |
Sbjct 352 TCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTGC 293
Query 23085 ATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAAT 23144
| |||||| | || || || | ||| |||||||||| || || ||||| | ||
Sbjct 292 AGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCAT 233
Query 23145 CCTTGTAGAGCATGTACGGCGTGCCCGTCTC 23175
||||||| |||||| | || | || |||||
Sbjct 232 CCTTGTAAAGCATGAAGGGGTTTCCGGTCTC 202
>seq15
Length=722239
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||||||||| ||||| |||||||| | || |||||| | |||
Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | |||||| | || |||||||| || | || || ||||||
Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || |||||||| |||||| |||| || || ||||||| || |||
Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||| | || |||| ||| | ||| | || ||||
Sbjct 456857 ATTCAGAAGGAGAGCACTTTGCACTTGGTCCTTCGTCTGCGTGGTGGTA 456809
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| || || |||||||| | || || || | ||
Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || || ||||||||||||| | ||||| ||||||
Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||||||||| ||| | ||||| || || ||| || |||
Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || |||||||| || ||||| || || ||
Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTGCT 457054
Score = 98.7 bits (108), Expect = 9e-16
Identities = 145/203 (71%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| |||||||| || ||||| || |||||| | || || || |||| |||| |||
Sbjct 457483 TCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCGTCAGACACGATCG 457424
Query 31263 AAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
| | || || || ||| | | |||||||||| | || ||||||||||| ||| |
Sbjct 457423 ACAATGTGAAGTCAAAGATTCAAG-ACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTG 457365
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| ||||| |||||||| | ||||| || || ||| || ||||| || |||
Sbjct 457364 ATCTTCGCCGGCAAACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAA 457305
Query 31382 GAATCGACTCTTCATCTGGTACT 31404
||||| || || |||||||| ||
Sbjct 457304 GAATCAACCCTCCATCTGGTGCT 457282
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| ||||| || |||||| | || ||||| | || |||| |||| | |||||
Sbjct 457760 ACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACGTCAAGAGC 457701
Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336
| || ||| |||||||| | || || ||||||||||| | || |||||||||||
Sbjct 457700 AAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCAAG 457641
Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396
||| | |||||| ||| | |||||| ||||| || |||||||| || |||||
Sbjct 457640 CAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTTCAC 457581
Query 31397 CTGGTACTTAGACTGAGGGGCGG 31419
|| || ||| | ||| | || ||
Sbjct 457580 CTTGTCCTTCGTCTGCGTGGAGG 457558
Score = 86.0 bits (94), Expect = 6e-12
Identities = 114/156 (73%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||||||||| || |||||||| ||| |||| || ||| | ||
Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | || | |||||| || || || || ||||| || | || || |||||
Sbjct 456749 GATACGATTGACAACGTCAAATCAAAG-ATTCAAGATAAGGAGGGTATCCCTCCAGACCA 456691
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||| | || |||||||| || ||| |||| ||
Sbjct 456690 GCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGA 456655
>seq2
Length=1065396
Score = 89.7 bits (98), Expect = 5e-13
Identities = 196/293 (67%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | ||||| || ||||| || ||||| |||||||| | ||||| | || ||
Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| || || || ||| ||| || || |||| || ||| | | || ||
Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGATGATGAACGCTACTTCATATCT 669401
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
|| || | || || ||||| || || || || || || ||||||||| | |||||||||
Sbjct 669400 CATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAGA 669341
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| ||| || || | | |||||| | || || ||||| || || | ||
Sbjct 669340 TTCAGCGGAGAGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGATG 669281
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859
|| ||| | ||||| || | || ||||| ||||| ||||| ||| | |||||
Sbjct 669280 GAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTACATCAAGGA 669228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765458318480
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