Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq57 181 9e-41 seq82 163 3e-35 seq15 116 3e-21 seq2 89.7 5e-13 >seq57 Length=16334 Score = 181 bits (200), Expect = 9e-41 Identities = 355/526 (67%), Gaps = 0/526 (0%) Strand=Plus/Minus Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398 || || || || |||| || | |||||| ||||||| ||| ||| || || |||||| Sbjct 16297 TTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCG 16238 Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458 || || || ||||||||| ||||||| | || | ||| || ||||| || |||||| Sbjct 16237 CGAACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGC 16178 Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518 || ||||| || || | ||||| || || || | ||| ||||| || || |||||||| Sbjct 16177 CAAGGCTCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTAT 16118 Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578 | ||| || |||||| |||| | |||||||| |||| ||||||||| | || Sbjct 16117 CTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTT 16058 Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638 || | | |||||| | || || | | ||| | || || ||| || || || | Sbjct 16057 CCTGAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCG 15998 Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698 | || || ||||| || || |||| |||||||| || || || |||||||| || Sbjct 15997 GTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCTTCC 15938 Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758 || | ||| | ||| || || | | ||||| || ||||| | || ||| || Sbjct 15937 TTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGA 15878 Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818 || || ||| || || || | | || ||||| | || || || ||||| || | Sbjct 15877 GTGGGTGAGGCATGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCT 15818 Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGT 23864 | || || || ||||| || | | || || ||||| ||||||| Sbjct 15817 TGGATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGT 15772 >seq82 Length=10320 Score = 163 bits (180), Expect = 3e-35 Identities = 673/1051 (64%), Gaps = 36/1051 (3%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 ||||||| || || |||||||||||||| ||||| | ||||||| | || || || Sbjct 1234 TGGTGCGTAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCACCCAGCGAAGTGCATGC 1175 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 ||| | || || | || | ||||| | |||| || ||| |||||| | Sbjct 1174 TCGTGATCTTGCCCATGGTGGGTTCTTTCATGTGAATGTTGAGAGATTGAGACTGATCAA 1115 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATG-TACGCATCGACATTTCCCATACG 22321 | ||||| || ||||| |||||||| | | ||||| | ||| || |||||||| || Sbjct 1114 TGAACGCGCCACGATCAGCGGCCATCTGAA-CAATGGTGCGCTGAGAGATTTCCCAGACA 1056 Query 22322 GTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCCTCTGGACGGACCCGT 22379 |||||||| || | ||| || || || ||| | || | |||| || || Sbjct 1055 GTCTTGTAGAGCGCCTTGAGGTCGGCAGGGAT--ATTGGGAATGTTTTGGATTGAACCAC 998 Query 22380 TATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTT 22439 || | ||||| || || || |||| ||| | ||| ||| | | ||| | Sbjct 997 CATCGGCAATGATACGGTTCTTCATGTTATCTGACCATAGACCCATGTCAACAAGATCCT 938 Query 22440 TGACCAGATGAC---GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAA 22496 | |||| | | |||| || ||||| ||||| |||| | ||| ||||| ||| | Sbjct 937 T---CAGAAGCCAGGGGTTGACGACTTGGAACTCTCCGGCAAGGACACGGCGAGAGTAGA 881 Query 22497 TGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGG 22556 ||||||||||| | || ||||| | || ||| |||||| ||| | ||| |||| Sbjct 880 TGTTGGATGTGTATGGCTCGAAGCACTCGTTGAATCCCAGAATCATACTGGTACTGGCGG 821 Query 22557 TCGGCATCGGCGCCAACAGTAGCGA---GTTTCTCAAGCCGTGCTTTGAAATTTTACTCT 22613 ||||||| || | ||||| ||| | ||| || | || ||| || ||| | || Sbjct 820 TCGGCATGGGTG-CAACA--AGCAAGCTGTTCCTAACACCATGCGCTGCAATCTCTTCCT 764 Query 22614 TGA--GCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTG 22671 | | ||||| ||| ||||| || || | ||| || ||||| |||||| || || || Sbjct 763 TCAATGCATC--CCAATCCCAAAGGTCTGTCGGGGTGACATT---CCACATGTCATACTG 709 Query 22672 CAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGC 22731 || | ||| || | || || || |||| |||||||| || | || ||| Sbjct 708 CAGAATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGGGCCGAGTTTCTTGGC 649 Query 22732 AAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAA 22791 ||| || ||| || || | ||| || |||||||||||||| | | ||||| Sbjct 648 AAGCTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAAGATCTGAATATTCAA 589 Query 22792 ----TTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCA 22847 |||| | |||| || ||| | || | ||||| || ||| ||||| |||| Sbjct 588 CTGCTTCGCCTGCGGAGA----ATCGAAAGGAAGACGCAGAGCCAGGAATGCGTCAGCCA 533 Query 22848 TACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCA 22907 |||||| || |||| | || || | || | | || | || ||||| || | Sbjct 532 GACCCTGGACACCTACTGCAATAGGCCTGTGTCGGAAGTTGCTCTTCTTAGCCTCTGGGA 473 Query 22908 AAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNN 22967 || || ||| |||||| | |||||||||| || ||||| | || | Sbjct 472 CTGGGTAGTGATTGACATCGATAATCTTGTTCAAGTTCTTGACCACAACCTGGGTGACCT 413 Query 22968 NNNNNNNNNNNTCAAAGTCGTAAACGCC--CGATTGTA-CAACAAACTTGTTGACGGCGA 23024 | ||||| || ||||| || | | |||| || | | |||| Sbjct 412 CGTGTAGTTTGCCGAAGTCATAGACGCCGTTGACAGCATCAACGAAGGTAGGCAGAGCGA 353 Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTAC 23084 |||| ||||| ||||| || || ||||| ||| || ||||| || || ||||| || | Sbjct 352 TCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTGC 293 Query 23085 ATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAAT 23144 | |||||| | || || || | ||| |||||||||| || || ||||| | || Sbjct 292 AGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCAT 233 Query 23145 CCTTGTAGAGCATGTACGGCGTGCCCGTCTC 23175 ||||||| |||||| | || | || ||||| Sbjct 232 CCTTGTAAAGCATGAAGGGGTTTCCGGTCTC 202 >seq15 Length=722239 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||||||||| ||||| |||||||| | || |||||| | ||| Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | |||||| | || |||||||| || | || || |||||| Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || |||||||| |||||| |||| || || ||||||| || ||| Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||| | || |||| ||| | ||| | || |||| Sbjct 456857 ATTCAGAAGGAGAGCACTTTGCACTTGGTCCTTCGTCTGCGTGGTGGTA 456809 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| || || |||||||| | || || || | || Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||||||| | ||||| |||||| Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | ||||| || || ||| || ||| Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || |||||||| || ||||| || || || Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTGCT 457054 Score = 98.7 bits (108), Expect = 9e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| |||||||| || ||||| || |||||| | || || || |||| |||| ||| Sbjct 457483 TCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCGTCAGACACGATCG 457424 Query 31263 AAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | | || || || ||| | | |||||||||| | || ||||||||||| ||| | Sbjct 457423 ACAATGTGAAGTCAAAGATTCAAG-ACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTG 457365 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| |||||||| | ||||| || || ||| || ||||| || ||| Sbjct 457364 ATCTTCGCCGGCAAACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAA 457305 Query 31382 GAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||||| || Sbjct 457304 GAATCAACCCTCCATCTGGTGCT 457282 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || |||||| | || ||||| | || |||| |||| | ||||| Sbjct 457760 ACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACGTCAAGAGC 457701 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||| |||||||| | || || ||||||||||| | || ||||||||||| Sbjct 457700 AAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCAAG 457641 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | |||||| ||| | |||||| ||||| || |||||||| || ||||| Sbjct 457640 CAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTTCAC 457581 Query 31397 CTGGTACTTAGACTGAGGGGCGG 31419 || || ||| | ||| | || || Sbjct 457580 CTTGTCCTTCGTCTGCGTGGAGG 457558 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| || |||||||| ||| |||| || ||| | || Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | |||||| || || || || ||||| || | || || ||||| Sbjct 456749 GATACGATTGACAACGTCAAATCAAAG-ATTCAAGATAAGGAGGGTATCCCTCCAGACCA 456691 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| | || |||||||| || ||| |||| || Sbjct 456690 GCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGA 456655 >seq2 Length=1065396 Score = 89.7 bits (98), Expect = 5e-13 Identities = 196/293 (67%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | ||||| || ||||| || ||||| |||||||| | ||||| | || || Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || || || || ||| ||| || || |||| || ||| | | || || Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGATGATGAACGCTACTTCATATCT 669401 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | || || ||||| || || || || || || ||||||||| | ||||||||| Sbjct 669400 CATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAGA 669341 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||| || || | | |||||| | || || ||||| || || | || Sbjct 669340 TTCAGCGGAGAGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGATG 669281 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 || ||| | ||||| || | || ||||| ||||| ||||| ||| | ||||| Sbjct 669280 GAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTACATCAAGGA 669228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765458318480