Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 >seq2 Length=1065396 Score = 131 bits (144), Expect = 2e-25 Identities = 301/451 (67%), Gaps = 2/451 (0%) Strand=Plus/Plus Query 33275 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33334 || ||| || ||| ||||| || ||||| || | || ||||| || || || || || Sbjct 668604 AGCCATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCC 668663 Query 33335 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAA 33394 | ||||||| ||| | |||||||| || || ||||||| || ||| | ||| | Sbjct 668664 TGCCAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAG-TGTTTCTGGT 668722 Query 33395 TCCCAATT-CAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCAC 33453 | |||| || | || | ||| || ||||| || || ||| ||||||| | Sbjct 668723 TGCCAAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGG 668782 Query 33454 AATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATA 33513 ||||||| |||| || | ||| |||||| |||| | ||||| || || || | | Sbjct 668783 AATTCATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCA 668842 Query 33514 CCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAA 33573 | || | || |||||| || | ||| || || | | | || || | Sbjct 668843 CAGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGA 668902 Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 | | |||||| || || || |||| ||||| || | ||| | |||||| || | Sbjct 668903 AGAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGA 668962 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | | ||||| ||||| ||||||||||| ||||||||||| ||||||||||| || || Sbjct 668963 AAGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCAC 669022 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 |||||||| || || || || ||||| || Sbjct 669023 TGAAGAAGATACCCTCCACAGCCGCAAAAGC 669053 Score = 102 bits (112), Expect = 1e-16 Identities = 178/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938 || ||||| ||||| || || ||||| || ||||||||||| | ||||| | |||| Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323 Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998 || || ||| | |||| ||| | | ||| || ||||| || || ||| || || Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383 Query 33999 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTA-GTTTATTCCAA 34055 || || || | ||||| ||| || || ||| || | || | | |||||||| Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCCAG 669443 Query 34056 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 34115 || | || ||||| || | ||| | ||||| | |||||||| |||||||| ||||| Sbjct 669444 TCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTC 669503 Query 34116 TTATACATATTCCAGAT 34132 |||||||| | ||| || Sbjct 669504 TTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816269510320