Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 6e-20
>seq2
Length=1065396
Score = 113 bits (124), Expect = 6e-20
Identities = 297/451 (66%), Gaps = 2/451 (0%)
Strand=Plus/Plus
Query 35851 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 35910
|| ||| || ||| ||||| || ||||| || | || ||||| || || || || ||
Sbjct 668604 AGCCATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCC 668663
Query 35911 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAA 35970
| | ||||| ||| | |||||||| ||||| |||||| || || | ||| |
Sbjct 668664 TGCCAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAG-TGTTTCTGGT 668722
Query 35971 TCCCAATT-CAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCAC 36029
| |||| || | || | ||| || || || || || ||| ||||||| |
Sbjct 668723 TGCCAAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGG 668782
Query 36030 AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGA 36089
||||||| |||| || | ||| |||||| |||| | ||||| || || || | |
Sbjct 668783 AATTCATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCA 668842
Query 36090 CCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA 36149
| || || || ||||||| | | | ||| || || | | || || |
Sbjct 668843 CAGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGA 668902
Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209
| | |||||| || || || || | ||||| || | ||| | |||||| || |
Sbjct 668903 AGAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGA 668962
Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269
| | ||||| ||||| ||||||||||| ||||||||||| ||||| || || || |||
Sbjct 668963 AAGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCAC 669022
Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300
||||| || || || || |||||||| ||
Sbjct 669023 TGAAGAAGATACCCTCCACAGCCGCAAAAGC 669053
Score = 105 bits (116), Expect = 9e-18
Identities = 195/284 (69%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 36428 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 36487
|| |||||||| | ||| || | || ||||| ||||| || || || || ||
Sbjct 669237 TAGGTATCAATGAGAAGCGAGTAGGTCTCAGAATGGATGTTCTCCATCATAATCTGGAAC 669296
Query 36488 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 36547
||||||||||| | ||||| | |||||| || ||| | |||| ||| | | |||
Sbjct 669297 CCGTAGAAACAGCGCGCCTCAGGAATCTGAACCTCTCCGCTGAATCTTTCGACAAGATTC 669356
Query 36548 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 36607
|| ||||| || |||||| || || || || || | ||||| ||| || || |
Sbjct 669357 TCGTTCACGATGCCGTCAGAAGCAGCGAAGAAGGCAAGGACATGAGATATGAAGTAGCGT 669416
Query 36608 TCGT--TTGGTGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCC 36664
|| | | | || | | |||||||| || | || ||||| || | ||| | |||||
Sbjct 669417 TCATCATCGTTGAGACGGTTATTCCAGTCGTGGAGGTCTTTGGAAAGATCGATCTCTTCA 669476
Query 36665 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708
| |||||||| |||||||| ||||| |||||||| | ||| ||
Sbjct 669477 GCAGTCCAAAAGGATGCCTCGGCCTTCTTATACATCTGCCATAT 669520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171409609960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |