Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2 113 6e-20 >seq2 Length=1065396 Score = 113 bits (124), Expect = 6e-20 Identities = 297/451 (66%), Gaps = 2/451 (0%) Strand=Plus/Plus Query 35851 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 35910 || ||| || ||| ||||| || ||||| || | || ||||| || || || || || Sbjct 668604 AGCCATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCC 668663 Query 35911 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAA 35970 | | ||||| ||| | |||||||| ||||| |||||| || || | ||| | Sbjct 668664 TGCCAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAG-TGTTTCTGGT 668722 Query 35971 TCCCAATT-CAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCAC 36029 | |||| || | || | ||| || || || || || ||| ||||||| | Sbjct 668723 TGCCAAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGG 668782 Query 36030 AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGA 36089 ||||||| |||| || | ||| |||||| |||| | ||||| || || || | | Sbjct 668783 AATTCATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCA 668842 Query 36090 CCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA 36149 | || || || ||||||| | | | ||| || || | | || || | Sbjct 668843 CAGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGA 668902 Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 | | |||||| || || || || | ||||| || | ||| | |||||| || | Sbjct 668903 AGAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGA 668962 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269 | | ||||| ||||| ||||||||||| ||||||||||| ||||| || || || ||| Sbjct 668963 AAGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCAC 669022 Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| || || || || |||||||| || Sbjct 669023 TGAAGAAGATACCCTCCACAGCCGCAAAAGC 669053 Score = 105 bits (116), Expect = 9e-18 Identities = 195/284 (69%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 36428 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 36487 || |||||||| | ||| || | || ||||| ||||| || || || || || Sbjct 669237 TAGGTATCAATGAGAAGCGAGTAGGTCTCAGAATGGATGTTCTCCATCATAATCTGGAAC 669296 Query 36488 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 36547 ||||||||||| | ||||| | |||||| || ||| | |||| ||| | | ||| Sbjct 669297 CCGTAGAAACAGCGCGCCTCAGGAATCTGAACCTCTCCGCTGAATCTTTCGACAAGATTC 669356 Query 36548 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 36607 || ||||| || |||||| || || || || || | ||||| ||| || || | Sbjct 669357 TCGTTCACGATGCCGTCAGAAGCAGCGAAGAAGGCAAGGACATGAGATATGAAGTAGCGT 669416 Query 36608 TCGT--TTGGTGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCC 36664 || | | | || | | |||||||| || | || ||||| || | ||| | ||||| Sbjct 669417 TCATCATCGTTGAGACGGTTATTCCAGTCGTGGAGGTCTTTGGAAAGATCGATCTCTTCA 669476 Query 36665 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708 | |||||||| |||||||| ||||| |||||||| | ||| || Sbjct 669477 GCAGTCCAAAAGGATGCCTCGGCCTTCTTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171409609960