Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 3e-24
>seq2
Length=1065396
Score = 127 bits (140), Expect = 3e-24
Identities = 304/457 (67%), Gaps = 2/457 (0%)
Strand=Plus/Plus
Query 49653 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 49712
|| ||| || ||| ||||| || ||||| || | || ||||| || || || || ||
Sbjct 668604 AGCCATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCC 668663
Query 49713 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 49772
| ||||||| ||| | |||||||| || || ||||||| || || | ||| |
Sbjct 668664 TGCCAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAG-TGTTTCTGGT 668722
Query 49773 TCCCAATT-CAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCAC 49831
| |||| || | || | ||| || || || || || ||| ||||||| |
Sbjct 668723 TGCCAAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGG 668782
Query 49832 AATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATA 49891
||||||| |||| || | ||| |||||| |||| | ||||| || || || | |
Sbjct 668783 AATTCATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCA 668842
Query 49892 CCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA 49951
| || || || ||||||| || | ||| || || | | || || |
Sbjct 668843 CAGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGA 668902
Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011
| | |||||| || || || |||| ||||| || | ||| |||||||| || |
Sbjct 668903 AGAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGA 668962
Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAG 50071
| | ||||| ||||| ||||||||||| ||||||||||| ||||| || || || |||
Sbjct 668963 AAGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCAC 669022
Query 50072 AAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
|||||||| || || || || ||||| || || ||
Sbjct 669023 TGAAGAAGATACCCTCCACAGCCGCAAAAGCGACGAG 669059
Score = 102 bits (112), Expect = 1e-16
Identities = 178/257 (69%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
|| ||||| ||||| || || ||||| || ||||||||||| | ||||| | ||||
Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || ||| | |||| ||| | | ||| || ||||| || |||||| || ||
Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383
Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAA 50433
|| || || | ||||| ||| || | ||| | | | || | | ||||||||
Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCCAG 669443
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|| | || ||||| || | ||| | ||||| | |||||||| |||||||| |||||
Sbjct 669444 TCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTC 669503
Query 50494 TTATACATATTCCAGAT 50510
|||||||| | ||| ||
Sbjct 669504 TTATACATCTGCCATAT 669520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267282657160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |