Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-23 >seq2 Length=1065396 Score = 125 bits (138), Expect = 1e-23 Identities = 300/451 (67%), Gaps = 2/451 (0%) Strand=Plus/Plus Query 41758 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCC 41817 || ||| || ||| ||||| || ||||| || | || ||||| || || ||||| || Sbjct 668604 AGCCATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCC 668663 Query 41818 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 41877 | ||||||| ||| | |||||||| || || ||||||| || || | ||| | Sbjct 668664 TGCCAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAG-TGTTTCTGGT 668722 Query 41878 TCCCAATT-CAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCAC 41936 | |||| || | || | ||| || | ||| || || ||| ||||||| | Sbjct 668723 TGCCAAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGG 668782 Query 41937 AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGA 41996 ||||||| |||| || | ||| |||||| |||| | ||||| || || || | | Sbjct 668783 AATTCATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCA 668842 Query 41997 CCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA 42056 | || || || ||||||| | | ||| || || | | || || | Sbjct 668843 CAGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGA 668902 Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 | | |||||| || || || |||| |||||||| | ||| | |||||| || | Sbjct 668903 AGAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGA 668962 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176 | | ||||| ||||| ||||||||||| ||||||||||| || || || || || ||| Sbjct 668963 AAGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCAC 669022 Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 |||||||| || || || |||||||| || Sbjct 669023 TGAAGAAGATACCCTCCACAGCCGCAAAAGC 669053 Score = 102 bits (112), Expect = 1e-16 Identities = 178/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || ||||| ||||| || || ||||| || ||||||||||| | ||||| | || | Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || || ||| | |||| ||| | | ||| |||||||| || |||||| || || Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTTATTCCAA 42538 || || || | ||||| ||| || || ||| || || || | |||||||| Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCCAG 669443 Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598 || | || ||||| || | ||| | ||||| | |||||||| ||||| || ||||| Sbjct 669444 TCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTC 669503 Query 42599 TTATACATATTCCAGAT 42615 |||||||| | ||| || Sbjct 669504 TTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137782218440