Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 1e-23
>seq2
Length=1065396
Score = 125 bits (138), Expect = 1e-23
Identities = 300/451 (67%), Gaps = 2/451 (0%)
Strand=Plus/Plus
Query 41758 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCC 41817
|| ||| || ||| ||||| || ||||| || | || ||||| || || ||||| ||
Sbjct 668604 AGCCATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCC 668663
Query 41818 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 41877
| ||||||| ||| | |||||||| || || ||||||| || || | ||| |
Sbjct 668664 TGCCAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAG-TGTTTCTGGT 668722
Query 41878 TCCCAATT-CAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCAC 41936
| |||| || | || | ||| || | ||| || || ||| ||||||| |
Sbjct 668723 TGCCAAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGG 668782
Query 41937 AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGA 41996
||||||| |||| || | ||| |||||| |||| | ||||| || || || | |
Sbjct 668783 AATTCATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCA 668842
Query 41997 CCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA 42056
| || || || ||||||| | | ||| || || | | || || |
Sbjct 668843 CAGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGA 668902
Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116
| | |||||| || || || |||| |||||||| | ||| | |||||| || |
Sbjct 668903 AGAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGA 668962
Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176
| | ||||| ||||| ||||||||||| ||||||||||| || || || || || |||
Sbjct 668963 AAGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCAC 669022
Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207
|||||||| || || || |||||||| ||
Sbjct 669023 TGAAGAAGATACCCTCCACAGCCGCAAAAGC 669053
Score = 102 bits (112), Expect = 1e-16
Identities = 178/257 (69%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| ||||| ||||| || || ||||| || ||||||||||| | ||||| | || |
Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| || ||| | |||| ||| | | ||| |||||||| || |||||| || ||
Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTTATTCCAA 42538
|| || || | ||||| ||| || || ||| || || || | ||||||||
Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCCAG 669443
Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598
|| | || ||||| || | ||| | ||||| | |||||||| ||||| || |||||
Sbjct 669444 TCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTC 669503
Query 42599 TTATACATATTCCAGAT 42615
|||||||| | ||| ||
Sbjct 669504 TTATACATCTGCCATAT 669520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137782218440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |