Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 116 5e-21 >seq2 Length=1065396 Score = 116 bits (128), Expect = 5e-21 Identities = 200/288 (69%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | ||||| || ||||| |||| ||||||||||| | |||||| ||||||| Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||| ||||| |||| ||| | | ||| | | || ||| || | || ||||| Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGATGATGAACGCTACTTCATATCT 669401 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 || | | |||||||| || | || || || ||||| ||||| |||| ||| || | | Sbjct 669400 CATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGA-AAG 669342 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 |||| |||| | ||||| |||| | || || ||||| ||||| || ||||| Sbjct 669341 ATTCAGCGGAGAGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGAT 669282 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| | || || || | ||||| || ||||| | ||||| Sbjct 669281 GGAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTACAT 669234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057634512440