Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq15 122 2e-22
seq2 105 2e-17
>seq15
Length=722239
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||||||||| || || ||||| || || || | || |||||||| || || |||
Sbjct 457069 GTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCA 457128
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || ||||| || || ||||| || ||||||||||| | ||
Sbjct 457129 GCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCGACTTC 457188
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || || ||||| | || || |||||||| || || ||
Sbjct 457189 ACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGTC 457248
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 457249 TTAACGAAGATCTGCAT 457265
Score = 102 bits (112), Expect = 2e-16
Identities = 138/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || ||||||||||| || || || || || || || | |||||
Sbjct 457572 AAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGGCCGTC 457631
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || || || ||||| || || | | ||| || |||||||| |||||||| |||||
Sbjct 457632 TTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCTTCCTTATC 457691
Query 104467 CTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525
||||||| ||||| || || || || | ||| || | || ||||| || || || |
Sbjct 457692 CTGAATC-TTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGG 457750
Query 104526 TCTTACCAGT 104535
|||| || ||
Sbjct 457751 TCTTGCCGGT 457760
Score = 100 bits (110), Expect = 7e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || ||||||||||| || || ||||| || || || | || |||
Sbjct 457282 AGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457341
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| |||||||| || || || || | | || || || ||||| |||||||| || ||
Sbjct 457342 TCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCT 457401
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||||| || ||||| || | || || | || ||||| | || || |||
Sbjct 457402 TGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTC 457461
Query 104528 TTACCAGTAAGTGTTTTTAC 104547
|| ||||| || || || ||
Sbjct 457462 TTGCCAGTGAGAGTCTTGAC 457481
>seq2
Length=1065396
Score = 105 bits (116), Expect = 2e-17
Identities = 197/287 (69%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792
|||||| |||||| || |||||| || || |||||||||| ||||| | |||||
Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461
Query 268793 TCTTATGACTTAATAGATTGGAAAAAT--TTAAAACCA-GAAGAAAGAAGATTTATATCT 268849
|| | ||| | || ||||| || | ||| | || ||| | || ||||||
Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGATGATGAACGCTACTTCATATCT 669401
Query 268850 TATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAG 268909
|| | ||||| || || || | | ||| || ||||| ||||| ||||| || || |
Sbjct 669400 CATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAGA 669341
Query 268910 TTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATA 268969
||| | |||||| ||||||||||| || | ||||| ||||| |||||||| ||
Sbjct 669340 TTCAGCGGAGAGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGATG 669281
Query 268970 GAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016
|| || || ||||| |||| ||| || | || ||||| || ||
Sbjct 669280 GAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTACAT 669234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395906862652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |