Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 140 4e-28 >seq2 Length=1065396 Score = 140 bits (154), Expect = 4e-28 Identities = 303/451 (67%), Gaps = 2/451 (0%) Strand=Plus/Plus Query 32997 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33056 || ||| || ||| ||||| || ||||| || | || ||||| || || || || || Sbjct 668604 AGCCATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCC 668663 Query 33057 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 33116 | ||||||| ||| | |||||||| || || ||||||| || || | ||| | Sbjct 668664 TGCCAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAG-TGTTTCTGGT 668722 Query 33117 TCCCAATT-CAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCAC 33175 | |||| || | || | ||| || ||||| || || ||| ||||||| | Sbjct 668723 TGCCAAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGG 668782 Query 33176 AATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATA 33235 ||||||| |||| || | ||| |||||| |||| | ||||| || || || | | Sbjct 668783 AATTCATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCA 668842 Query 33236 CCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA 33295 | || || || ||||||| || | ||| || || | | || || | Sbjct 668843 CAGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGA 668902 Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 | | |||||| || || || |||| ||||| || | ||| |||||||| || | Sbjct 668903 AGAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGA 668962 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 | | ||||| ||||| ||||||||||| ||||||||||| ||||||||||| || ||| Sbjct 668963 AAGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCAC 669022 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 |||||||| || || || || ||||| || Sbjct 669023 TGAAGAAGATACCCTCCACAGCCGCAAAAGC 669053 Score = 105 bits (116), Expect = 8e-18 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || ||||| ||||| || || ||||| || ||||||||||| | ||||| | |||| Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || ||| | |||| ||| | | ||| || ||||| || |||||| || || Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTA-GTTTATTCCAA 33777 || || || | ||||| ||| || || ||| || | || | | |||||||| Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCCAG 669443 Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837 || | || ||||| || | ||| | ||||| | |||||||| |||||||| ||||| Sbjct 669444 TCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTC 669503 Query 33838 TTATACATGTTCCAGAT 33854 |||||||| | ||| || Sbjct 669504 TTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945884024040