Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq15 116 3e-21 seq9 107 2e-18 seq5 102 8e-17 seq2 98.7 9e-16 >seq15 Length=722239 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| || || | ||| |||||| || |||||||| || Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||| || ||||||||||| |||||| Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| | | || |||| | || | ||||| | || |||| Sbjct 456703 ATACCCTCCTTATC-TTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGAC 456761 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||||| || || ||||| || ||||| |||||||| Sbjct 456762 CTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | || |||||| ||||||||||| |||||| Sbjct 456811 CCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 456870 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||| || || ||| |||| || ||||||||||| || ||| Sbjct 456871 AATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGG 456930 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || |||| | || | ||||||| ||| || | Sbjct 456931 ATACCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACT 456990 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || ||||| || ||||| Sbjct 456991 TCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| || || || || |||||||| ||| | Sbjct 457039 CCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457098 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || |||||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 457099 AGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGG 457158 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || ||| ||| | | || | || || | ||||| | Sbjct 457159 ATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACC 457218 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || ||||| || || || || ||||| |||||||| Sbjct 457219 TCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | ||| | ||| || || || || |||||||| ||| | Sbjct 457267 CCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457326 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || || ||||| ||| |||| ||||| |||||||| |||||| Sbjct 457327 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGG 457386 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| | | || ||| | | || | || || | ||||||| Sbjct 457387 ATTCCTTCCTTGTC-TTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGAC 457445 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || || || ||||| || |||| Sbjct 457446 CTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||| || || | || | ||| || || || || |||||||||||| Sbjct 457557 GCCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGA 457616 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||| || ||||||||||| ||| |||| || ||||||||||| ||||| Sbjct 457617 GAGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGG 457676 Query 131127 GATTCCTTCTTTGTC 131141 |||||||| || || Sbjct 457677 AATTCCTTCCTTATC 457691 >seq9 Length=790667 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||| ||||| | || | |||||||||||| || |||||||| || | Sbjct 434592 CCGCCACGCAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAC 434651 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||| | ||||||||| ||||||||| Sbjct 434652 AGAGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 434711 Query 131128 ATTCCTTCTTTGTCGGTGA 131146 || ||||| ||||| |||| Sbjct 434712 ATCCCTTCCTTGTCTGTGA 434730 >seq5 Length=849029 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | || || ||||| ||||||||||| ||| ||| Sbjct 477692 CCTTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGA 477751 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 ||||||||||||| ||||| || ||||| || || || ||| ||| ||||| | | Sbjct 477752 TTAAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGT 477811 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| ||||||||| || | ||| | ||| || || || || || || |||| Sbjct 477812 CGATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 477871 Query 131225 A 131225 | Sbjct 477872 A 477872 >seq2 Length=1065396 Score = 98.7 bits (108), Expect = 9e-16 Identities = 299/460 (65%), Gaps = 13/460 (3%) Strand=Plus/Minus Query 46142 CGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201 |||| ||||| | || | || || |||||| ||||||||| |||| || |||| Sbjct 669076 CGACCTTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCT 669017 Query 46202 GTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261 || || ||||||||| | || | ||| ||||||| || ||| | || | Sbjct 669016 CGTTCGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGA 668957 Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321 |||| || || || || || ||||| ||||||| |||||||| ||| | || Sbjct 668956 ACGAACTCATTTCACGTGATGAGGGGATGCATACTGACTTTGCTTGTTTGCTCTT----- 668902 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGC-----ATGTTCAAGGAGGC 46376 ||||| | || || | || || | || |||| | || ||| ||||| Sbjct 668901 CTCGCA--CTTGAGAAACC-GCCCCAGCCAAGCTGCTATTCTCGCTATTATCACCGAGGC 668845 Query 46377 GGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAA 46436 ||| | || ||| || | ||||| || | || ||||| ||| ||||| || ||||| Sbjct 668844 TGTGACGATCGAGCAGAAATTTTTGACTGAGGCTCTGCCATGTGCTCTGCTAGGGATGAA 668785 Query 46437 CGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCA 46496 | | | ||| | ||||||||||| || || || || |||||||| |||| Sbjct 668784 TTCCAACTTGATGAAGCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGG 668725 Query 46497 CCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGA 46556 | | | ||| || | || || |||||| || || || ||| | | ||||| ||| Sbjct 668724 CAACCAGAAACACTACCATTCGGCCAATCCTTTCGACTTCATGGAGAGTATCTCATTGGC 668665 Query 46557 GGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTAT 46596 ||||| || || || ||||| ||| | ||||| || ||| Sbjct 668664 AGGCAAGACCAACTTCTTCGAGAAGAGGGTCGGTGACTAT 668625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011802872960