Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq15 116 3e-21
seq9 107 2e-18
seq5 102 8e-17
seq2 98.7 9e-16
>seq15
Length=722239
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||||||| || || | ||| |||||| || |||||||| ||
Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| |||| || ||||||||||| ||||||
Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || || || ||| | | || |||| | || | ||||| | || ||||
Sbjct 456703 ATACCCTCCTTATC-TTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGAC 456761
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||||| ||||| || || ||||| || ||||| ||||||||
Sbjct 456762 CTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || || || | || |||||| ||||||||||| ||||||
Sbjct 456811 CCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 456870
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| ||||| || || ||| |||| || ||||||||||| || |||
Sbjct 456871 AATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGG 456930
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || |||| | || | ||||||| ||| || |
Sbjct 456931 ATACCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACT 456990
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| ||||| || ||||| || |||||
Sbjct 456991 TCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| | || | ||| || || || || |||||||| ||| |
Sbjct 457039 CCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457098
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || |||||||||||||| ||| |||| | |||||||||||| || |||
Sbjct 457099 AGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGG 457158
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || ||| ||| | | || | || || | ||||| |
Sbjct 457159 ATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACC 457218
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || ||||| || || || || ||||| ||||||||
Sbjct 457219 TCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265
Score = 111 bits (122), Expect = 1e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| | ||| | ||| || || || || |||||||| ||| |
Sbjct 457267 CCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457326
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || || || ||||| ||| |||| ||||| |||||||| ||||||
Sbjct 457327 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGG 457386
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||| ||||| ||| | | || ||| | | || | || || | |||||||
Sbjct 457387 ATTCCTTCCTTGTC-TTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGAC 457445
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | ||| || || || ||||| || ||||
Sbjct 457446 CTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || |||| ||| || || | || | ||| || || || || ||||||||||||
Sbjct 457557 GCCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGA 457616
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||| || ||||||||||| ||| |||| || ||||||||||| |||||
Sbjct 457617 GAGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGG 457676
Query 131127 GATTCCTTCTTTGTC 131141
|||||||| || ||
Sbjct 457677 AATTCCTTCCTTATC 457691
>seq9
Length=790667
Score = 107 bits (118), Expect = 2e-18
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||| ||||| | || | |||||||||||| || |||||||| || |
Sbjct 434592 CCGCCACGCAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAC 434651
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| |||| | ||||||||| |||||||||
Sbjct 434652 AGAGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 434711
Query 131128 ATTCCTTCTTTGTCGGTGA 131146
|| ||||| ||||| ||||
Sbjct 434712 ATCCCTTCCTTGTCTGTGA 434730
>seq5
Length=849029
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | || || ||||| ||||||||||| ||| |||
Sbjct 477692 CCTTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGA 477751
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
||||||||||||| ||||| || ||||| || || || ||| ||| ||||| | |
Sbjct 477752 TTAAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGT 477811
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || ||| ||||||||| || | ||| | ||| || || || || || || ||||
Sbjct 477812 CGATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 477871
Query 131225 A 131225
|
Sbjct 477872 A 477872
>seq2
Length=1065396
Score = 98.7 bits (108), Expect = 9e-16
Identities = 299/460 (65%), Gaps = 13/460 (3%)
Strand=Plus/Minus
Query 46142 CGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201
|||| ||||| | || | || || |||||| ||||||||| |||| || ||||
Sbjct 669076 CGACCTTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCT 669017
Query 46202 GTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261
|| || ||||||||| | || | ||| ||||||| || ||| | || |
Sbjct 669016 CGTTCGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGA 668957
Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321
|||| || || || || || ||||| ||||||| |||||||| ||| | ||
Sbjct 668956 ACGAACTCATTTCACGTGATGAGGGGATGCATACTGACTTTGCTTGTTTGCTCTT----- 668902
Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGC-----ATGTTCAAGGAGGC 46376
||||| | || || | || || | || |||| | || ||| |||||
Sbjct 668901 CTCGCA--CTTGAGAAACC-GCCCCAGCCAAGCTGCTATTCTCGCTATTATCACCGAGGC 668845
Query 46377 GGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAA 46436
||| | || ||| || | ||||| || | || ||||| ||| ||||| || |||||
Sbjct 668844 TGTGACGATCGAGCAGAAATTTTTGACTGAGGCTCTGCCATGTGCTCTGCTAGGGATGAA 668785
Query 46437 CGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCA 46496
| | | ||| | ||||||||||| || || || || |||||||| ||||
Sbjct 668784 TTCCAACTTGATGAAGCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGG 668725
Query 46497 CCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGA 46556
| | | ||| || | || || |||||| || || || ||| | | ||||| |||
Sbjct 668724 CAACCAGAAACACTACCATTCGGCCAATCCTTTCGACTTCATGGAGAGTATCTCATTGGC 668665
Query 46557 GGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTAT 46596
||||| || || || ||||| ||| | ||||| || |||
Sbjct 668664 AGGCAAGACCAACTTCTTCGAGAAGAGGGTCGGTGACTAT 668625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011802872960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |