Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq15 129 5e-25
>seq15
Length=722239
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | ||||| || ||| |||| || ||||| ||| || ||
Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || ||||| || || ||||||||||||||||| ||||| || ||
Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || |||||| | |||||| ||| || | ||| ||||||
Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858
Query 22399 ATTCAAAAAGA 22409
||||| || ||
Sbjct 456857 ATTCAGAAGGA 456847
Score = 105 bits (116), Expect = 6e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 22302 AAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAA 22361
||| |||||||||||||| || || || ||||| || |||||| | || || ||||||||
Sbjct 457410 AAAGATTCAAGACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTGATCTTCGCCGGCAA 457351
Query 22362 ACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACA 22421
||| | || ||| ||||||| | ||||| |||||||| || |||||||| ||| | ||
Sbjct 457350 ACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAATCAACCCTCCA 457291
Query 22422 T 22422
|
Sbjct 457290 T 457290
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || |||||| | || || || || ||| | |
Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | ||||| ||| |||||||| ||||||||||| || || || ||
Sbjct 456749 GATACGATTGACAACGTCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCAG 456690
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || ||| | |||||| ||| || | || || ||||||
Sbjct 456689 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAAC 456630
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 456629 ATCCAGAAGGA 456619
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| || || | | || ||| | ||| | ||||
Sbjct 457760 ACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACGTCAAGAGC 457701
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| || ||||| || ||||| || || || || || | || || || |||||
Sbjct 457700 AAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCAAG 457641
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | || || ||| || |||||||||||||||| || |||||||||||| | ||
Sbjct 457640 CAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTTCAC 457581
Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445
| || | || |||| |||||
Sbjct 457580 CTTGTCCTTCGTCTGCGTGGAGG 457558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727135491485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |