Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq5 113 9e-20
seq24 91.5 3e-13
>seq5
Length=849029
Score = 113 bits (124), Expect = 9e-20
Identities = 144/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || |||| |||||||| ||||| ||||| || ||||||||| | ||||| |||||
Sbjct 699566 CTCTCGTATTGCCGTCATTGGGCCCAACGGTGCTGGCAAGTCTACCTTGATCAACGTCCT 699507
Query 280220 GACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGG 280278
|||||| || || || || || || || ||| ||| ||||| || || |
Sbjct 699506 GACTGGTGA-ACTCATCCCTACCTCTGGTGAGGTCTGGGCTCATGAGAACATCCGTATCG 699448
Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338
| ||| || |||||||||||| |||||||| ||||| |||||| |||||||
Sbjct 699447 CCTACATCAAGCAGCACGCTTTCGCTCACATCGACCACCACTTGGACAAGACTCCTTCGG 699388
Query 280339 AATACATTCAGTGGCG 280354
||||||| ||||||||
Sbjct 699387 AATACATCCAGTGGCG 699372
Score = 98.7 bits (108), Expect = 2e-15
Identities = 124/168 (74%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| ||| ||||||| | ||||||||||| || ||||| ||||| |
Sbjct 699009 CCAACTTCGGTCTCGACGCCGAGTTGGTCTCCCACTCTCGCATGCGTGGTCTGTCTGGTG 698950
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAG-CAGCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| |||| ||| | | |||| |||||||| ||||||| |||||||
Sbjct 698949 GTCAGCGTGTCAAGGTTGTGCTCGCCGCCTGCTC-GTGGCAACGCCCTCACTTGATCGTG 698891
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
| ||||| || |||||||| || ||||| || |||| ||||||
Sbjct 698890 TTGGACGAACCCACCAACTACCTCGACCGTGACTCGTTGGGTGCTCTG 698843
>seq24
Length=520401
Score = 91.5 bits (100), Expect = 3e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227
||| | |||| || |||| ||||| ||||| || || || ||||| | |||||||||
Sbjct 113049 TTGCTATCATCGGCGCCAACGGTGCTGGTAAATCCACGCTTATCAAGATGTTGACTGGCG 113108
Query 280228 AGACCCAGGCCAC-TGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTC 280286
||| ||| |||| ||||| || ||||||||| || |||| || | |||| ||
Sbjct 113109 AGA-CCATCCCACAGGAGGGTAAAGTGGAGAAGCATCCTAATCTGCGTATCGGTTACATC 113167
Query 280287 GCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATT 280346
||||| ||| | | ||| | |||| ||| |||||| ||| |||||||| || |
Sbjct 113168 AAGCAGCATGCTCTTGAGCACGTGGAGATGCACATGGACAAGACACCTAACCAGTATCTG 113227
Query 280347 CAGTGGCGCTATGC 280360
|| ||| | |||||
Sbjct 113228 CAATGGAGGTATGC 113241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834574412129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |