Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 113 9e-20 seq24 91.5 3e-13 >seq5 Length=849029 Score = 113 bits (124), Expect = 9e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| |||||||| ||||| ||||| || ||||||||| | ||||| ||||| Sbjct 699566 CTCTCGTATTGCCGTCATTGGGCCCAACGGTGCTGGCAAGTCTACCTTGATCAACGTCCT 699507 Query 280220 GACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGG 280278 |||||| || || || || || || || ||| ||| ||||| || || | Sbjct 699506 GACTGGTGA-ACTCATCCCTACCTCTGGTGAGGTCTGGGCTCATGAGAACATCCGTATCG 699448 Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338 | ||| || |||||||||||| |||||||| ||||| |||||| ||||||| Sbjct 699447 CCTACATCAAGCAGCACGCTTTCGCTCACATCGACCACCACTTGGACAAGACTCCTTCGG 699388 Query 280339 AATACATTCAGTGGCG 280354 ||||||| |||||||| Sbjct 699387 AATACATCCAGTGGCG 699372 Score = 98.7 bits (108), Expect = 2e-15 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| ||| ||||||| | ||||||||||| || ||||| ||||| | Sbjct 699009 CCAACTTCGGTCTCGACGCCGAGTTGGTCTCCCACTCTCGCATGCGTGGTCTGTCTGGTG 698950 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAG-CAGCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| |||| ||| | | |||| |||||||| ||||||| ||||||| Sbjct 698949 GTCAGCGTGTCAAGGTTGTGCTCGCCGCCTGCTC-GTGGCAACGCCCTCACTTGATCGTG 698891 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 | ||||| || |||||||| || ||||| || |||| |||||| Sbjct 698890 TTGGACGAACCCACCAACTACCTCGACCGTGACTCGTTGGGTGCTCTG 698843 >seq24 Length=520401 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| | |||| || |||| ||||| ||||| || || || ||||| | ||||||||| Sbjct 113049 TTGCTATCATCGGCGCCAACGGTGCTGGTAAATCCACGCTTATCAAGATGTTGACTGGCG 113108 Query 280228 AGACCCAGGCCAC-TGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTC 280286 ||| ||| |||| ||||| || ||||||||| || |||| || | |||| || Sbjct 113109 AGA-CCATCCCACAGGAGGGTAAAGTGGAGAAGCATCCTAATCTGCGTATCGGTTACATC 113167 Query 280287 GCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATT 280346 ||||| ||| | | ||| | |||| ||| |||||| ||| |||||||| || | Sbjct 113168 AAGCAGCATGCTCTTGAGCACGTGGAGATGCACATGGACAAGACACCTAACCAGTATCTG 113227 Query 280347 CAGTGGCGCTATGC 280360 || ||| | ||||| Sbjct 113228 CAATGGAGGTATGC 113241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834574412129