Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq15 170 4e-37
seq5 123 5e-23
>seq15
Length=722239
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || || ||||| |||||||| || |||||
Sbjct 457039 CCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457098
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||||| |||||| || ||||| || || | || ||||| || ||
Sbjct 457099 AGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGG 457158
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| |||||||| | ||| || ||||||||||||| || || ||
Sbjct 457159 ATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACC 457218
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || ||||| |||||||| ||||| ||||||||
Sbjct 457219 TCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265
Score = 161 bits (178), Expect = 2e-34
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| || || || || ||||| |||||||| || |||||
Sbjct 457267 CCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457326
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | || || |||||||| || | | ||| |||||||| ||
Sbjct 457327 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGG 457386
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||||||||||||||||| ||| || ||||| ||||||| || || ||
Sbjct 457387 ATTCCTTCCTTGTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACC 457446
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|||||||||||||| || || ||||| ||||||||||
Sbjct 457447 TCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483
Score = 149 bits (164), Expect = 1e-30
Identities = 156/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || || | || | ||| || ||||| ||||| |||||||| |||||||||
Sbjct 457558 CCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAG 457617
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || ||||| | |||||| || ||||| || | | || ||||| || |||
Sbjct 457618 AGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 457677
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| || |||||||| ||||||| ||||||||||| | ||| || ||
Sbjct 457678 ATTCCTTCCTTATCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAACC 457737
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 457738 TCAAGGGTGATGGTCTTGCCGGTGA 457762
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| || || ||| || |||||||| || || ||
Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || | || || ||||| || ||
Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||||||||||| |||||| || || || || | ||||| ||
Sbjct 456703 ATACCCTCCTTATCTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACC 456762
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| || ||||| || || || ||||||||||| ||||||||
Sbjct 456763 TCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809
Score = 116 bits (128), Expect = 7e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| | ||| ||| || || ||||| || |||
Sbjct 456811 CCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 456870
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| ||| | ||||| || | ||| || || ||||| || | | || ||||| |||||
Sbjct 456871 AATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGG 456930
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| | ||||| |||||||| || | ||||| |||
Sbjct 456931 ATACCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACT 456990
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || || || ||||||||||| || |||||
Sbjct 456991 TCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037
>seq5
Length=849029
Score = 123 bits (136), Expect = 5e-23
Identities = 137/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| ||||||| ||||| || | |||||| || ||||| ||
Sbjct 477694 TTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATT 477753
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| | || || || || ||||| || ||||| || || ||||| | |||||| |||
Sbjct 477754 AAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGTCG 477813
Query 68394 ATGGTGTCTGCTG-ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| ||||| |||| | || || || | ||||||||| || ||||| ||||||||||||||
Sbjct 477814 ATTGTGTC-GCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 477872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620453072680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |