Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 138 2e-27 seq57 111 3e-19 >seq2 Length=1065396 Score = 138 bits (152), Expect = 2e-27 Identities = 306/445 (69%), Gaps = 13/445 (3%) Strand=Plus/Minus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || || ||| | || || ||||| ||||||||| ||| | ||||| |||||||| Sbjct 669059 CTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTCGCTTCCATCTTT 669000 Query 42765 TGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||| ||| || || || ||||| ||||| | ||||||||||||||||| | Sbjct 668999 TGGCTTAAGAAGCGTGGCCTC-ATGCCTGGACTGTCTTTCTCGAACGAACTCATTTCACG 668941 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883 || |||||| |||||| |||||||| || | || |||||| ||| | || || Sbjct 668940 TGATGAGGGGATGCATACTGACTTTGCTTGTTTGCTCTTCTCG---CACTTGAGAAACCG 668884 Query 42884 GCCC-TCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942 ||| | ||| || | | || || ||||| ||||| ||| ||||||| || | | Sbjct 668883 CCCCAGCCAAGCTGC-TATTCTCGCTATTATCACCGAGGCTGTGACGATCGAGCAGAAAT 668825 Query 42943 TCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACCTCATG-TGCAA 43000 | | || || | ||||| ||| | ||| | || ||||| | || | ||| |||| Sbjct 668824 TTTTGACTGAGGCTCTGCCATGTG-CTCTGCTAGGGATGAATTCCAACTTGATGAAGCAA 668766 Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACA 43059 |||||| ||| ||| || || | || || || | ||| ||| | |||| Sbjct 668765 -TACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAG-AAACACTACC 668708 Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119 | || | || |||||||| ||||||| ||||| |||| |||||||||||||| | Sbjct 668707 ATTCGGCCAATCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGCAAGACCAACTTCT 668648 Query 43120 TCGAGAAGCGCGTCGCCGACTACCA 43144 |||||||| | |||| ||||| || Sbjct 668647 TCGAGAAGAGGGTCGGTGACTATCA 668623 Score = 89.7 bits (98), Expect = 1e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||| || ||||||||||| || || ||||| || | | || |||| Sbjct 669394 CTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAGATTCAGC 669335 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 |||||| ||| |||||||||||| |||||||| |||||||| || |||||| Sbjct 669334 GGAGAGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGATGGAGAAC 669275 Query 42543 GTGCACTCTGAG 42554 | || |||||| Sbjct 669274 ATCCATTCTGAG 669263 >seq57 Length=16334 Score = 111 bits (122), Expect = 3e-19 Identities = 387/600 (65%), Gaps = 6/600 (1%) Strand=Plus/Minus Query 244999 CTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCT 245058 || ||||| || |||||| | || ||| |||| || || |||| ||||| | || | Sbjct 16295 CTCGACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCG 16236 Query 245059 CTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCA 245118 || || ||| |||||| | || || | ||| || || || || | ||||| Sbjct 16235 AACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCA 16176 Query 245119 GGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCT 245178 ||||| | |||| ||| | || || || ||||||||||| || ||||| || || Sbjct 16175 AGGCTCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTATCT 16116 Query 245179 CTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238 || |||||| | ||| || | || || || ||||| ||| || || || || Sbjct 16115 GGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCC 16056 Query 245239 CTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTG 245298 |||||| | || || | | || | | |||| | || | || || ||| Sbjct 16055 TGAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCGGT 15996 Query 245299 CTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTT 245358 ||||||||| | ||| || |||| | |||||| || || || |||||||| ||| Sbjct 15995 CTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCTTCCTT 15936 Query 245359 CATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGT 245418 ||||| || || |||||||||| ||||| | || || | | | ||||| ||||| Sbjct 15935 CATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGAGT 15876 Query 245419 GGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTC 245478 ||| ||| || || || | | | | || | || || || | || | | Sbjct 15875 GGGTGAGGCATGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTTG 15816 Query 245479 GATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG-GGGCGTCTCGA 245537 ||| | || |||||||||| || || || ||||| ||||||| |||||| || | Sbjct 15815 GATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGTGCTGTGGGCGT-TCAA 15757 Query 245538 TGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 || | ||| | |||| ||| || ||||| || ||||||||||||||||| Sbjct 15756 --CAACCTGCTTATCCATACGAAGCAAGTACGAACGCTCAAGAGTCTTGAACCCAAAGTA 15699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337205083440