Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq15 140 8e-28
seq5 113 1e-19
seq2 102 2e-16
>seq15
Length=722239
Score = 140 bits (154), Expect = 8e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || ||||| |||| || |||||| ||||| || |||||||
Sbjct 457039 CCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457098
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||||| || || || |||||||| |||||||| || | |||
Sbjct 457099 AGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGG 457158
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || ||||| || |||| ||||| || || || | || || || ||
Sbjct 457159 ATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACC 457218
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct 457219 TCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | || | ||||| || || || || || ||||||
Sbjct 456811 CCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 456870
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | ||||| || |||||||||| ||||| || ||||
Sbjct 456871 AATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGG 456930
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || ||||| || | ||| || || || || | |||| ||||| |||
Sbjct 456931 ATACCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACT 456990
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||||||||| |||||||||||||||||||| || |||||
Sbjct 456991 TCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037
Score = 120 bits (132), Expect = 7e-22
Identities = 167/233 (72%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| ||||| | || || | || | || || || || ||||| || |||||
Sbjct 456580 TGCCCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCT 456639
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || || || || || || | || || || |||||||||| ||||| || |||
Sbjct 456640 GAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGG---TCT 456696
Query 288364 GG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
|| ||| || || ||||| || || || | ||| ||||| || || | ||| |||
Sbjct 456697 GGAGGGATACCCTCCTTATCTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGAT 456756
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || ||||| ||||| ||||||||||||||||| ||||||||
Sbjct 456757 TCGACCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809
Score = 116 bits (128), Expect = 9e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || ||||| | || |||||| ||||| || |||||||
Sbjct 457267 CCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457326
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | |||||| || |||||||||| ||| || || |||
Sbjct 457327 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGG 457386
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || || || || || | ||||| || || || | || ||| || ||
Sbjct 457387 ATTCCTTCCTTGTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACC 457446
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| | ||||| ||||| || || |||||||||||||
Sbjct 457447 TCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483
>seq5
Length=849029
Score = 113 bits (124), Expect = 1e-19
Identities = 135/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| || || ||||| || || | || || || ||||||||
Sbjct 477694 TTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATT 477753
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
| |||||| ||| || ||| ||||| || ||||||||||| |||| || || ||
Sbjct 477754 AAACGCTGCTGA---TCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTG 477810
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||||| || || || || || ||||| ||||| || ||||| |||||||||
Sbjct 477811 TCGATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACG 477870
Query 288463 AA 288464
||
Sbjct 477871 AA 477872
>seq2
Length=1065396
Score = 102 bits (112), Expect = 2e-16
Identities = 140/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 269130 TGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGA 269189
||| ||| | |||||| || || | || |||||| || | | ||||| ||||| |||||
Sbjct 668817 TGAGGCTCTGCCATGTGCTCTGCTAGGGATGAATTCCAACTTGATGAAGCAATACATCGA 668758
Query 269190 ATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAA 269249
||||| |||||||| | || || || || | ||||| ||| ||||| ||
Sbjct 668757 GTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAGAAACACTACCATTCGGCCAA 668698
Query 269250 TCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCG 269309
||| |||| ||| ||||| || || | | ||| ||||| ||||||||||| ||| |
Sbjct 668697 TCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGCAAGACCAACTTCTTCGAGAAGAG 668638
Query 269310 TGTCAGCGACTATCAA 269325
||| | |||||||||
Sbjct 668637 GGTCGGTGACTATCAA 668622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179651845679582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |