Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq15 123 3e-23 >seq15 Length=722239 Score = 123 bits (136), Expect = 3e-23 Identities = 172/236 (73%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 41975 TTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 42034 |||| | || || | | ||||| |||||| |||| || |||||||| || || ||||| Sbjct 456576 TTATTGCCCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTA 456635 Query 42035 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094 || | ||||| || | || || ||||||||||||||||| || | |||||||||||| Sbjct 456636 GTCTGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTC 456695 Query 42095 GGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTC 42152 | || | | |||||| | | ||| | |||| ||||| ||| | | | ||| || Sbjct 456696 TGGAGGGATACCCTCCTTAT-CTTGAATCTTTGATTTGA-CGTTGTCAATCGTATCAGAA 456753 Query 42153 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || |||| || || ||||| || || || ||||| || ||||| ||||| Sbjct 456754 GATTCGACCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| ||||| ||||||||||| ||||| ||||| || || || || | || || Sbjct 456829 ACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCC 456888 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 ||||| ||||||||||| || | ||||||||||| | ||| | | ||||||||| | Sbjct 456889 AGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGG 456948 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || ||||| | | | || ||| ||||| || || | ||||| || ||| Sbjct 456949 ATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTG 457008 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| || ||||||||||| Sbjct 457009 CCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || || || ||||| || | ||| || || | || ||||||||||| |||||||| Sbjct 457075 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAG 457134 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || || ||||||||||| | || | || ||||||||| ||| | || | || | | Sbjct 457135 ATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC-TGAATCTTCGACTTCACATT 457193 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || ||||| || | ||||| || || ||||| || ||||| || Sbjct 457194 GTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAAC 457253 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 457254 GAAGATCTGCAT 457265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211652462960