Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq15 109 5e-19 seq9 84.2 2e-11 >seq15 Length=722239 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | ||| || || |||| || |||||||| || ||||||||||| | | Sbjct 457558 CCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAG 457617 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || ||||||||||||||||||| || | || | ||||||||||| |||||| Sbjct 457618 AGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 457677 Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359 |||||||| || || || || || Sbjct 457678 ATTCCTTCCTTATCCTGAATCTT 457700 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || |||||||| || |||||||| || | | |||||| | ||| Sbjct 457054 AGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457113 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | || || ||||||||||| || || || ||||| || || Sbjct 457114 TCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 457173 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | ||||| || | ||| | ||| Sbjct 457174 TGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTC 457233 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||| || || ||||| || ||||| Sbjct 457234 TTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||| | || |||||||| || |||||||| || | | |||||| | ||| Sbjct 457282 AGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457341 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || |||||||| | || | || |||||||||||||| |||||||| || ||| Sbjct 457342 TCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCT 457401 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| ||| || | || || | || || || | || | |||| Sbjct 457402 TGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTC 457461 Query 64412 TTGCCGGTCAAAGTTTTTACGA 64433 ||||| || | ||| || |||| Sbjct 457462 TTGCCAGTGAGAGTCTTGACGA 457483 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | || || | || || ||||| || || || | Sbjct 456847 TCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAG 456906 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | |||||||||||| || || || || || || ||||| || || || ||| Sbjct 456907 ATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGATTTGACATTG 456966 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| || || ||||||| || | ||||||||||||| ||| || ||| Sbjct 456967 TCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACG 457026 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 457027 AAGATTTGCAT 457037 >seq9 Length=790667 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | ||||| || |||| ||||| || || || |||||||| || | Sbjct 434591 ACCGCCACGCAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 434650 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || ||||||||||| ||||| | || || |||||||| || ||||| Sbjct 434651 CAGAGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 434710 Query 64336 AATTCCTTCTTTTTCT 64351 || ||||| || ||| Sbjct 434711 GATCCCTTCCTTGTCT 434726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643744500360