Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq15 102 8e-17 seq9 89.7 5e-13 >seq15 Length=722239 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| ||||| ||||| || |||||||| | | Sbjct 456846 CTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCCAGCTGTTTACCAGCGAA 456905 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | ||||| ||||| || || ||||| || ||||| ||| || ||| | ||| Sbjct 456906 GATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGATTTGACATT 456965 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||| |||| || || || || | || | ||| || || |||||||| || | Sbjct 456966 G-TCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGA 457024 Query 138602 CAAAAATCTGCAT 138614 | || || ||||| Sbjct 457025 CGAAGATTTGCAT 457037 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| | |||||| ||||| || || ||||| | | Sbjct 456618 CTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAA 456677 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| | ||||| ||||| ||||| ||||| || || || ||| | |||| ||| | | Sbjct 456678 GATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTTATC-TTGAATCTTTGATTTGACGT 456736 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | || || | || || ||||||| || | |||||| ||||||||||| || Sbjct 456737 TG-TCAATCGTATCAGAAGATTCGACCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTG 456795 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 456796 ACGAAGATCTGCAT 456809 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| || || || |||||||||||| || || || || || || || || || | Sbjct 457070 TTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCAG 457129 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTT 138536 |||| |||||||| ||||| || || || ||||| ||||| ||| | || | || Sbjct 457130 CGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTC-CTGAATCTTCGACTTC 457188 Query 138537 TAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 |||| || | |||||| | ||||||||||| | || | ||| ||||| ||||| || Sbjct 457189 ACATTG-TCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGT 457247 Query 138597 TTTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 457248 CTTAACGAAGATCTGCAT 457265 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | |||| || || || |||||||||||| | Sbjct 457267 CCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457326 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || ||||||||||| |||| |||| | ||| || ||||| ||||| Sbjct 457327 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGG 457386 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | |||| || |||| || | ||||| | |||||| | Sbjct 457387 ATTCCTTCCTTGTC-TTGAATCTTTGACTTCACATTG-TCGATCGTGTCTGACGACTCGA 457444 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| | || | || || ||||| ||||| || || Sbjct 457445 CCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGAC 457481 >seq9 Length=790667 Score = 89.7 bits (98), Expect = 5e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| ||| | || | || | | | |||||||| || ||||||||||| | Sbjct 434592 CCGCCACGCAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAC 434651 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| || || || |||| |||| |||||||| || |||||||| Sbjct 434652 AGAGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 434711 Query 138508 ATACCTTCTTTGTCGGTGA 138526 || ||||| ||||| |||| Sbjct 434712 ATCCCTTCCTTGTCTGTGA 434730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261351645680