Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq15 111 1e-19 seq5 86.0 6e-12 >seq15 Length=722239 Score = 111 bits (122), Expect = 1e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | ||| ||| || || || ||||| || Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || |||||| |||||||||||||||| || ||||| Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||| | | ||| | | || |||| |||| || | || || | | |||| Sbjct 456703 ATACCCTCCTTAT-CTTGAATCTTTGATTTGACGTTG-TCAATCGTATCAGAAGATTCGA 456760 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| ||| | |||||| || |||||||| || || || |||||||| Sbjct 456761 CCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || || || ||| || |||||||| |||||| | Sbjct 456846 CTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCCAGCTGTTTACCAGCGAA 456905 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||||| |||||||| || || || || ||||||||||| ||| || |||| | Sbjct 456906 GATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGATTTGACATT 456965 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| || | || ||||| | || | ||| |||||||||||||| || || Sbjct 456966 GTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGAC 457025 Query 127102 AAAAATCTGCAT 127113 || || ||||| Sbjct 457026 GAAGATTTGCAT 457037 >seq5 Length=849029 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || |||||| |||| || ||||||||||| || || || |||||||| Sbjct 477726 ATCCTCGAGCTGCTTGCCAGCGAAGATTAAACGCTGCTGATCCGGGGGAATTCCCTCCTT 477785 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| ||| ||||| | |||| ||||| | |||||| || | ||| | Sbjct 477786 ATCCTGGATCTTCGACTTGACATTGTCGATTGTGTCGCTGGACTCGACCTCAAGGGTGAT 477845 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || ||||| ||||| || || || || Sbjct 477846 GGTCTTGCCCGTCAGGGTCTTGACGAA 477872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499795504560