Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq15 111 1e-19
seq5 86.0 6e-12
>seq15
Length=722239
Score = 111 bits (122), Expect = 1e-19
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| |||||| || | ||| ||| || || || ||||| ||
Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || |||||| |||||||||||||||| || |||||
Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| |||||||| | | ||| | | || |||| |||| || | || || | | ||||
Sbjct 456703 ATACCCTCCTTAT-CTTGAATCTTTGATTTGACGTTG-TCAATCGTATCAGAAGATTCGA 456760
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| |||| ||| | |||||| || |||||||| || || || ||||||||
Sbjct 456761 CCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || ||||| ||||| |||| || || || ||| || |||||||| |||||| |
Sbjct 456846 CTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCCAGCTGTTTACCAGCGAA 456905
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041
|||||| |||||||| || || || || ||||||||||| ||| || |||| |
Sbjct 456906 GATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGATTTGACATT 456965
Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|||| ||| || | || ||||| | || | ||| |||||||||||||| || ||
Sbjct 456966 GTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGAC 457025
Query 127102 AAAAATCTGCAT 127113
|| || |||||
Sbjct 457026 GAAGATTTGCAT 457037
>seq5
Length=849029
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017
||| || ||||| || |||||| |||| || ||||||||||| || || || ||||||||
Sbjct 477726 ATCCTCGAGCTGCTTGCCAGCGAAGATTAAACGCTGCTGATCCGGGGGAATTCCCTCCTT 477785
Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| ||| ||||| | |||| ||||| | |||||| || | ||| |
Sbjct 477786 ATCCTGGATCTTCGACTTGACATTGTCGATTGTGTCGCTGGACTCGACCTCAAGGGTGAT 477845
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| ||||| ||||| || || || ||
Sbjct 477846 GGTCTTGCCCGTCAGGGTCTTGACGAA 477872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499795504560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |