Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq82 138 1e-27 seq26 96.9 4e-15 >seq82 Length=10320 Score = 138 bits (152), Expect = 1e-27 Identities = 796/1249 (64%), Gaps = 40/1249 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| |||||||| || || ||||||| || | ||||| | Sbjct 1229 CGTAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCACCCAGCGAAGTGCATGCTCGTG 1170 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 115676 | |||| | || || || |||| | ||| | | ||| || ||||| ||||| Sbjct 1169 ATCTTGCCCATGGTGGGTTCTTTCATGTGAATGTTGAGAGATTGAGACTGATCAATGAAC 1110 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGT 115733 ||| || ||||| || ||||| | || || || | | || ||||||||| ||||| Sbjct 1109 GCG-CCACGATCAGCGGCCATCTGAA-CA-ATGGTGCG-CTGAGAGATTTCCCAGACAGT 1054 Query 115734 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGC 115793 ||||||| ||| | || | ||||||| || |||||||| || ||||| | Sbjct 1053 CTTGTAGAGCGCCTTGAGGTCGGCAGGGATATTGGGAATGTTTTGGATTGAACCACCATC 994 Query 115794 CTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTC 115850 | | |||| | | |||||| | | |||||| ||||| || | ||||||| Sbjct 993 ---GGCAATGATACGGTTCTTCATGTTATCTGACCATAGACCCATGTCAACAAGATCCTT 937 Query 115851 CA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAG 115905 || | ||| | ||||| || ||||| || || ||| || | ||| ||| Sbjct 936 CAGAAGCCAGGGG----TTGACGACTTGGAACTCTCCGGCAAGGACACGGCG-AGAGTAG 882 Query 115906 ATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGC 115964 ||||||| ||||||||||| |||||||| ||| |||| || | ||| | ||| Sbjct 881 ATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAATCCCA-GAATCATACTGGTACTGGC 823 Query 115965 TGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTT 116024 || ||||||||||| | || | |||||| | | ||| | | ||| |||||| Sbjct 822 GGTCGGCATGGGTGCAACAAGCAAGCTGTTCCTAACACCATGCGCTGCAATCTCTTCCTT 763 Query 116025 GAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTCCCACATATCAAACTGGAG 116081 | || ||||| || | || | |||| | | |||||| ||| |||| || Sbjct 762 CAATGCATCCCAATCCCAA---AGGTCTGTCGGGGTGACATTCCACATGTCATACTGCAG 706 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 || ||||| || | || ||||||||| | | ||| || ||||| || || | Sbjct 705 AATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGGGCCGAGTTTCTTGGCAAG 646 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 || || || |||| ||||| || || ||||| || || || ||||| Sbjct 645 CTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAAGATCTGAATATTCAACTG 586 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGACCTT 116260 ||| |||| ||||| || | ||||| || | | ||| | || || ||||| | Sbjct 585 CTTCGCCTGCGGAGAATCGAAAGGAAGACG-CAGAGCCAGGAATGCGTCAGCCAGACCCT 527 Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGA 116319 ||||||| | |||| || | |||| | || ||| ||| ||| || || Sbjct 526 GGACACCTACTGCAATAGGCCTGTGTCGGAAGTTGCTCTTCTTAGCC-TCTGGGACTGGG 468 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 || ||| |||||||| | | || | || ||| ||||||| |||| || || Sbjct 467 TAGTGATTGACATCGATAATCTTGTTCAAGTTCTTGACCACAACCTGGGTGACCTCGTGT 408 Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 116439 || || || | ||| | || | | ||| || | |||| || ||||| || Sbjct 407 AGTTTGCCGAAGTCATAGACGCCGTTGACAGCATCAACGAAGGTAGGCAGAGCGATCGAA 348 Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 || || || ||||||| |||||| ||||||| || | |||||||| || | | Sbjct 347 GCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTGCAGAGA 288 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || || || || || | || || || || ||| ||| || ||||||||| Sbjct 287 TTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTG 228 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || ||||| | || | || ||||| ||||| | | ||||| || | ||| | | || Sbjct 227 TAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATTGCGTACCACAGCTTC 168 Query 116619 GGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTC 116678 | |||| | || | | | | || || |||| || ||||| ||| ||||| || Sbjct 167 TG-GGCTTTGATAGATGTGCGGCCACGGCCTTCCTTTTCATACTTCTCGTAAAGGGCTTC 109 Query 116679 AAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737 || || || || ||| | || | || || || |||| || || |||||||| | || Sbjct 108 GAATTCATCGCCATACA-CGTCGGCCAGACCAGGAGCCTCATTGGGGCAGAAGAGTGTCC 50 Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 116786 | | | || ||| |||||||||||||| | || ||| |||| || Sbjct 49 AATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATAG 1 >seq26 Length=513936 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 12872 CTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAAC 12931 ||| || | ||| ||||| || |||||||||| || || || ||||| || Sbjct 306353 CTTTCCAATGGCATCAATCTCATCAATGAAAATAATGCAAGGCGCATTTTTCTTCGCTCG 306294 Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991 | |||| ||| ||||||||| | ||| ||||| ||||||||||| || || | | Sbjct 306293 GGCGAAGAGATCGCGCACTCTCGAAGGACCAACACCAACAAACATCTCGACGAACTCAGA 306234 Query 12992 GGCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050 | || || || | ||| ||||| |||||||||||| ||||| ||| || | || Sbjct 306233 GCCGCTGACGCTGAA-GAAAGGGACTCCAGATTCACCCGCGGTGGCTTTGGCTAGCAAGG 306175 Query 13051 TCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 |||| || || || ||| || | ||||| |||||| || || ||| ||||||| Sbjct 306174 TCTTACCTGTACCAGGTGGACCAGAGAGAATGGCACCTCGAGGAATCTTGGCACC 306120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505903966040