Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq82 138 1e-27
seq26 96.9 4e-15
>seq82
Length=10320
Score = 138 bits (152), Expect = 1e-27
Identities = 796/1249 (64%), Gaps = 40/1249 (3%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| ||||||||||| |||||||| || || ||||||| || | ||||| |
Sbjct 1229 CGTAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCACCCAGCGAAGTGCATGCTCGTG 1170
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 115676
| |||| | || || || |||| | ||| | | ||| || ||||| |||||
Sbjct 1169 ATCTTGCCCATGGTGGGTTCTTTCATGTGAATGTTGAGAGATTGAGACTGATCAATGAAC 1110
Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGT 115733
||| || ||||| || ||||| | || || || | | || ||||||||| |||||
Sbjct 1109 GCG-CCACGATCAGCGGCCATCTGAA-CA-ATGGTGCG-CTGAGAGATTTCCCAGACAGT 1054
Query 115734 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGC 115793
||||||| ||| | || | ||||||| || |||||||| || ||||| |
Sbjct 1053 CTTGTAGAGCGCCTTGAGGTCGGCAGGGATATTGGGAATGTTTTGGATTGAACCACCATC 994
Query 115794 CTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTC 115850
| | |||| | | |||||| | | |||||| ||||| || | |||||||
Sbjct 993 ---GGCAATGATACGGTTCTTCATGTTATCTGACCATAGACCCATGTCAACAAGATCCTT 937
Query 115851 CA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAG 115905
|| | ||| | ||||| || ||||| || || ||| || | ||| |||
Sbjct 936 CAGAAGCCAGGGG----TTGACGACTTGGAACTCTCCGGCAAGGACACGGCG-AGAGTAG 882
Query 115906 ATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGC 115964
||||||| ||||||||||| |||||||| ||| |||| || | ||| | |||
Sbjct 881 ATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAATCCCA-GAATCATACTGGTACTGGC 823
Query 115965 TGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTT 116024
|| ||||||||||| | || | |||||| | | ||| | | ||| ||||||
Sbjct 822 GGTCGGCATGGGTGCAACAAGCAAGCTGTTCCTAACACCATGCGCTGCAATCTCTTCCTT 763
Query 116025 GAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTCCCACATATCAAACTGGAG 116081
| || ||||| || | || | |||| | | |||||| ||| |||| ||
Sbjct 762 CAATGCATCCCAATCCCAA---AGGTCTGTCGGGGTGACATTCCACATGTCATACTGCAG 706
Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141
|| ||||| || | || ||||||||| | | ||| || ||||| || || |
Sbjct 705 AATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGGGCCGAGTTTCTTGGCAAG 646
Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201
|| || || |||| ||||| || || ||||| || || || |||||
Sbjct 645 CTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAAGATCTGAATATTCAACTG 586
Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGACCTT 116260
||| |||| ||||| || | ||||| || | | ||| | || || ||||| |
Sbjct 585 CTTCGCCTGCGGAGAATCGAAAGGAAGACG-CAGAGCCAGGAATGCGTCAGCCAGACCCT 527
Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGA 116319
||||||| | |||| || | |||| | || ||| ||| ||| || ||
Sbjct 526 GGACACCTACTGCAATAGGCCTGTGTCGGAAGTTGCTCTTCTTAGCC-TCTGGGACTGGG 468
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
|| ||| |||||||| | | || | || ||| ||||||| |||| || ||
Sbjct 467 TAGTGATTGACATCGATAATCTTGTTCAAGTTCTTGACCACAACCTGGGTGACCTCGTGT 408
Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 116439
|| || || | ||| | || | | ||| || | |||| || ||||| ||
Sbjct 407 AGTTTGCCGAAGTCATAGACGCCGTTGACAGCATCAACGAAGGTAGGCAGAGCGATCGAA 348
Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499
|| || || ||||||| |||||| ||||||| || | |||||||| || | |
Sbjct 347 GCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTGCAGAGA 288
Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559
|| || || || || || | || || || || ||| ||| || |||||||||
Sbjct 287 TTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTG 228
Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618
|| ||||| | || | || ||||| ||||| | | ||||| || | ||| | | ||
Sbjct 227 TAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATTGCGTACCACAGCTTC 168
Query 116619 GGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTC 116678
| |||| | || | | | | || || |||| || ||||| ||| ||||| ||
Sbjct 167 TG-GGCTTTGATAGATGTGCGGCCACGGCCTTCCTTTTCATACTTCTCGTAAAGGGCTTC 109
Query 116679 AAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737
|| || || || ||| | || | || || || |||| || || |||||||| | ||
Sbjct 108 GAATTCATCGCCATACA-CGTCGGCCAGACCAGGAGCCTCATTGGGGCAGAAGAGTGTCC 50
Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 116786
| | | || ||| |||||||||||||| | || ||| |||| ||
Sbjct 49 AATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATAG 1
>seq26
Length=513936
Score = 96.9 bits (106), Expect = 4e-15
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 12872 CTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAAC 12931
||| || | ||| ||||| || |||||||||| || || || ||||| ||
Sbjct 306353 CTTTCCAATGGCATCAATCTCATCAATGAAAATAATGCAAGGCGCATTTTTCTTCGCTCG 306294
Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991
| |||| ||| ||||||||| | ||| ||||| ||||||||||| || || | |
Sbjct 306293 GGCGAAGAGATCGCGCACTCTCGAAGGACCAACACCAACAAACATCTCGACGAACTCAGA 306234
Query 12992 GGCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050
| || || || | ||| ||||| |||||||||||| ||||| ||| || | ||
Sbjct 306233 GCCGCTGACGCTGAA-GAAAGGGACTCCAGATTCACCCGCGGTGGCTTTGGCTAGCAAGG 306175
Query 13051 TCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105
|||| || || || ||| || | ||||| |||||| || || ||| |||||||
Sbjct 306174 TCTTACCTGTACCAGGTGGACCAGAGAGAATGGCACCTCGAGGAATCTTGGCACC 306120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505903966040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |