Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq5 122 1e-22 seq15 120 3e-22 >seq5 Length=849029 Score = 122 bits (134), Expect = 1e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| || || || | || |||||||||||||| ||||| | Sbjct 477692 CCTTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGA 477751 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | || |||||||| || | || | | |||||| ||| ||||||| ||||| | Sbjct 477752 TTAAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGT 477811 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||||| || || || || | |||||||| ||||||||||| || || || | Sbjct 477812 CGATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 477871 Query 46584 AG 46585 || Sbjct 477872 AG 477873 >seq15 Length=722239 Score = 120 bits (132), Expect = 3e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||||| || || | | ||||| ||||| |||| ||||||||||| ||||| ||||| Sbjct 456576 TTATTGCCCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTA 456635 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || ||||| || | || || |||||||| || ||||| ||||| ||||||||||| Sbjct 456636 GTCTGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTC 456695 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538 | || | | |||||| || ||||| |||| ||| | | | ||| || | Sbjct 456696 TGGAGGGATACCCTCCTTATCTTGAATCTTTGATTTGA-CGTTGTCAATCGTATCAGAAG 456754 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || | || || ||||| || ||||| || || || ||||| ||||| Sbjct 456755 ATTCGACCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| ||||||||||| || ||||| | || || ||||||||||| ||||| Sbjct 457075 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAG 457134 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | ||| | || ||||||||| |||||| ||| | | Sbjct 457135 ATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTG 457194 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || ||||| |||| ||||| || || |||||||| || ||||| Sbjct 457195 TCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACG 457254 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 457255 AAGATCTGCAT 457265 Score = 102 bits (112), Expect = 9e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||||| || || ||||||||| | || || | || || Sbjct 456829 ACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCC 456888 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || || ||||| ||||| ||||||||||| | || | | ||||||||| | Sbjct 456889 AGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGG 456948 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||| | | | || ||| ||||| || || | ||||| || ||| Sbjct 456949 ATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTG 457008 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || ||||||||||| Sbjct 457009 CCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 102 bits (112), Expect = 9e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||||||| | || || || ||||| ||||||||||| || ||||| | Sbjct 457278 ACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 457337 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || ||||| || ||||||||||| ||||| || |||||||||| || | | ||||| Sbjct 457338 ATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTT 457397 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||| ||| | | | | |||||| ||| || || |||| ||||| Sbjct 457398 GTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGAT 457457 Query 46558 GGTTTTGCCCGTCAGCGTTTTAAC 46581 ||| ||||| || || || || || Sbjct 457458 GGTCTTGCCAGTGAGAGTCTTGAC 457481 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| ||||| ||||| || || || |||| || ||||||||||| ||||| Sbjct 457594 TCTTTCTGGATGTTGTAATCGGAGAGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAG 457653 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||||||||||||||| | || | | ||||| ||| ||||| |||||| ||| Sbjct 457654 ATCAAGCGCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTGCTCTTGA-CGTT 457712 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | ||||| || || || || | |||||||| ||||| || Sbjct 457713 GTCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGT 457760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237205933880