Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 5e-38
seq15 105 7e-18
seq5 96.9 3e-15
>seq2
Length=1065396
Score = 172 bits (190), Expect = 5e-38
Identities = 351/514 (68%), Gaps = 8/514 (2%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| ||||| |||||||| || || ||| | ||||| || || || || || || |
Sbjct 668607 CATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGC 668666
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT--GGTGCCG 132708
||| || || | ||| || || || || ||||| | | |||||| || ||| |
Sbjct 668667 CAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAGTGTTTCTGGTTGCC 668726
Query 132709 ATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAA 132768
| || | |||||||| | || || |||||||||||||||||| ||| | | ||
Sbjct 668727 A--AGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAA 668784
Query 132769 TTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGAC 132827
|| | || |||||| |||| ||||| || || || | ||| |||||||| | ||
Sbjct 668785 TTCATCCCTAGCAGA-GCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCAC 668843
Query 132828 CGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA 132887
|| ||||||| || | || || ||| || || | ||| ||| |||
Sbjct 668844 AGCCTCGGTGATAATAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCTCAAGTGCGAGAA 668903
Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947
| ||| ||||||||||| ||||| ||||| || | |||||||||||||| |||
Sbjct 668904 GAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAA 668963
Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007
|| || || ||||||||||| || || || |||||||| |||| ||||| |||
Sbjct 668964 AGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACT 669023
Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067
||||||| ||||| || ||||| ||||| || ||||| | |||| || | | |||
Sbjct 669024 GAAGAAGATACCCTCCACAGCCGCAAAAGCGACGAGGCGTTGTGCGAAGGTCGAATTTTT 669083
Query 133068 G-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
| || | ||||| || | ||||| || |||||
Sbjct 669084 GTCTTG-TATCCATCGGATGGCCCAGTCTGCCTT 669116
Score = 109 bits (120), Expect = 5e-19
Identities = 190/276 (69%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| || ||||| ||| || | || || || | ||||||||| || || ||
Sbjct 669236 GTAGGTATCAATGAGAAGCGAGTAGGTCTCAGAATGGATGTTCTCCATCATAATCTGGAA 669295
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||||| || || |||||||| | ||| || ||| ||| | ||||| |||||
Sbjct 669296 CCCGTAGAAACAGCGCGCCTCAGGAATCTGAACCTCTCCGCTGAATCTTTCGACAAGATT 669355
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
||||| ||||||||||| || ||||| ||||| || || || ||||| | |||
Sbjct 669356 CTCGTTCACGATGCCGTCAGAAGCAGCGAAGAAGGCAAGGACATGAGATATGAAGTAGCG 669415
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
|| | ||||| | || | ||||||| | ||| ||||| || || | ||| ||
Sbjct 669416 TTCATCATCGTTGAGACGGTTATTCCAGTCGTGGAGGTCTTTGGAAAGATCGATCTCTTC 669475
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| |||||||| || |||||||| || || |||||
Sbjct 669476 AGCAGTCCAAAAGGATGCCTCGGCCTTCTTATACAT 669511
>seq15
Length=722239
Score = 105 bits (116), Expect = 7e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313
|||| || || ||||| ||||| ||||||||| | || |||||| | | |||| |
Sbjct 457483 TCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCGTCAGACACGATCG 457424
Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373
| | | || ||| || | ||||| || ||||| || ||||||| || || | |
Sbjct 457423 ACAATGTGAAGTCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTGA 457364
Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433
| | ||| |||||||| || || || | |||||||| ||||||||||||||| || |
Sbjct 457363 TCTTCGCCGGCAAACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAG 457304
Query 38434 AAGCGACGCTGCATTTGGTGCTGCGT 38459
|| | || || ||| ||||||| |||
Sbjct 457303 AATCAACCCTCCATCTGGTGCTCCGT 457278
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| | || || || || ||
Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | ||| || |||| ||||| ||||| || || | |||||
Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|||||| | || | ||| || ||||||||||| || | || || | | ||||||||||
Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| || ||||| ||| || |||| ||||| || ||| || | || ||
Sbjct 456857 ATTCAGAAGGAGAGC-ACTTTGCACTTGGTCCTTCGTCTGCGTGGTGG 456811
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || ||||| || ||| |||| ||||| | |
Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | || |||| | ||| ||| || | || || ||||| || || | |||||
Sbjct 456749 GATACGATTGACAACG-TCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCA 456691
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| || || |||||||| || | || || || ||||||||
Sbjct 456690 GCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAA 456631
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| || ||||| ||||||||||||
Sbjct 456630 CATCCAGAAGGAGAGTACCCTGCACTTGGTGCTGCGT 456594
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || ||||| || || ||||| | || || ||| | |
Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
|||| | | | | | || || || | ||||| || || || |||||| |||||
Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCAT-CCCGCCTGACCA 457147
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| ||||| ||||| || || | |||||||| |||||||||
Sbjct 457146 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 457087
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| || ||| | || || || | ||||| |||
Sbjct 457086 CATCCAGAAAGAATCAACCCTTCACCTCGTGCTCCGT 457050
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||| ||||||||| | || || ||| | | |||| | | | |||| | ||
Sbjct 457762 TCACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACG--TCAA 457705
Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383
|| || || | || || || |||||||| | ||||| ||||| | || | ||| ||
Sbjct 457704 GAGCAAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGG 457645
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443
||| ||||| || |||| || || ||| ||| ||||||||||| || ||| | || ||
Sbjct 457644 CAAGCAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCT 457585
Query 38444 GCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|| | || || ||| || | || |||
Sbjct 457584 TCACCTTGTCCTTCGTCTGCGTGGAGGC 457557
>seq5
Length=849029
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| | || |||||| ||| ||||| |
Sbjct 477872 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACAATC 477813
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| || || |||||||||||| | || || ||||| |
Sbjct 477812 GACAATGTCAAGTCGAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCAGCAGCGTTTA 477753
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| ||||| || || | || || || ||||||||||||||| |||
Sbjct 477752 ATCTTCGCTGGCAAGCAGCTCGAGGATGGACGGACACTTTCCGACTACAACATCCAGAAG 477693
Query 38433 G 38433
|
Sbjct 477692 G 477692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171743384960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |