Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq17 275 8e-69 seq28 178 2e-39 seq23 156 5e-33 >seq17 Length=698222 Score = 275 bits (304), Expect = 8e-69 Identities = 468/676 (69%), Gaps = 8/676 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || |||| |||||||| || ||||| Sbjct 469191 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTCGACTTGACTTCGAAAATACCC 469132 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | |||| |||||||| || |||||||| ||||| || || || || || Sbjct 469131 TCCTCGATGGTCAACAGAGAAACATCGAAAGTACCACCGCCCAGATCGAAGATCAGGACA 469072 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| ||| | || ||||| || |||||||| ||||| || || || || ||||| Sbjct 469071 TTCCGCTCGCCTTCGGCCTTCTTGTCAAGACCGTATGCGATGGCAGCGGCGGTAGGTTCG 469012 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||||||| ||||| || || || | || || || || ||||| ||| Sbjct 469011 TTGATGATACGAAGAACGTTCAAACCGGCGATGAGACCAGCGTCCTTGGTGGCTTGACGT 468952 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| ||||| || || || || ||||| |||| |||| | |||||| Sbjct 468951 TGCGAGTCGTTGAAGTATGCGGGAACTGTGACGACGGCGTTGTTGACGGTACCACCGAGG 468892 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || ||||| || | || |||| ||||| || ||||| | || ||||| |||| | Sbjct 468891 TATGATTCGGCAGTCTCCCTCATCTTGGTGAGCACCATGGCAGAGATCTCCTCAGGTGTG 468832 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG-G 7875 |||| ||||| || || || || || || | || | || || || || |||| Sbjct 468831 AACTCCTTCGTCTCGCCCTTGAACTCGACCTGGATGACAGGCTT----GCCGCCCCGGTC 468776 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 || ||| || ||| | | ||||| ||| | || |||| || | || || | Sbjct 468775 GACAACTTTGAACGGGAAGTGCTTCATGTCGGCCTGCACCTCAGCATCGGCGAATTTGCG 468716 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 || || | ||||| || || || | |||||| ||| |||||||| ||||||||| Sbjct 468715 GCCAATTAACCGCTTGGCGTCGAAGATTGTGTTCGCGGGATTCATGGCGACTTGGTTCTT 468656 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 ||| || || ||||| ||||| || | ||||| || || ||| | || || ||||| Sbjct 468655 CGCGGCATCACCGATCAGACGCTC---GGTGTCCGTGAAGGCCACGAAGGAAGGTGTCGT 468599 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || || || || ||||| ||||| | ||||| | | | || || ||||| Sbjct 468598 CCGGTTTCCCTGATCATTGGCAATGATTTCGATACGGTCATCTCTATACACTCCCACGCA 468539 Query 8116 CGAATACGTTGTTCCT 8131 || || ||||| ||| Sbjct 468538 AGAGTAGGTTGTGCCT 468523 Score = 150 bits (166), Expect = 2e-31 Identities = 256/371 (69%), Gaps = 0/371 (0%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| ||||| ||||| |||||||| || | || || Sbjct 469683 ATGGCGGCCTGGACAGCAGCTCCGTACGCGACAGCCTCGTCGGGGTTGATGGACTTGTTG 469624 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | | || || || |||||| || || ||| Sbjct 469623 GGCTCCTTGCCGTTGAAGAAGTCGGAAACAAGTTTCTGGATACGCGGGATACGGGTGGAT 469564 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 ||||||||||| ||||| || | || || || |||||||| | ||| || | Sbjct 469563 CCACCGACCAAGACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCGTCGCGCAAGACA 469504 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || || || ||||| | ||||| | ||| || || || || ||||| ||| Sbjct 469503 CGCTCAACGGGCTCCATGGTTGAGCGGAAGAGATCCTGGCAAAGCTCTTCGAAACGAGCA 469444 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| || || || |||||||| | || ||| | | || || |||||||||| || Sbjct 469443 CGGGTGATTGAGGTGTAGAAATCGATACCCTCGAACAGAGAGTCGATTTCAATGGAGGTC 469384 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | ||||| | || ||||| || ||||| || || || || | |||||| || Sbjct 469383 TGGGCGGAAGAAGAGAGTGTGCGCTTGGCACGCTCGCAAGCGGTACGCAGACGACGCAGA 469324 Query 7382 GCACGCGGGTT 7392 ||||||| ||| Sbjct 469323 GCACGCGCGTT 469313 >seq28 Length=470712 Score = 178 bits (196), Expect = 2e-39 Identities = 251/353 (71%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||||||||| |||||||| || || || || || ||| ||||| || ||| Sbjct 127602 TCGAAATCTTCACCTCCCAAGTGAGTGTCACCTGCTGTTGCTAGAACTTCGAAAGCACCC 127661 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | ||| ||||| || ||||||||||| || || | | | || Sbjct 127662 TTGTCGATGGACAGGAGCGAGACATCGAAAGTACCACCACCAAGATCGTACACCAAGACT 127721 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || || || | |||| || ||||| ||||| || || || |||||||| || Sbjct 127722 TGTTTCTCCTCTTCACCGGTCTTGTCCAGACCATACGCAATGGCGGCGGCCGTTGGCTCG 127781 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | ||||| ||| ||||||||||| ||| || | || || || || ||||| | | Sbjct 127782 TTGACGATACGGAGAACGTTCAGGCCAGAAATGGTACCAGCGTCCTTAGTTGCTTGCCTT 127841 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| || |||||||| || || || || |||| ||||| ||||| || ||| Sbjct 127842 TGAGCGTCGTTGAAATAGGCCGGAACAGTGACAACGGCGTGGGTGACCTTCTTGCCAAGA 127901 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || |||||||| || |||||||| ||||||||| | || |||||||| Sbjct 127902 TAGCTCTCCGCGATCTCCTTCATTTTACCAAGAACCATGGCGGAGATCTCTTC 127954 >seq23 Length=538764 Score = 156 bits (172), Expect = 5e-33 Identities = 360/540 (67%), Gaps = 3/540 (1%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| ||||| ||||| |||||||| || | | ||| || |||| ||| | | || Sbjct 522970 CAGATCCTCGAAACGAGCACGGGTGATCTGAGCGTTGAAGTCCTCGCCATCGAAGAGAGA 523029 Query 7303 ATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGC 7362 || || || | ||| ||||| || | || | || ||||| || ||||| || || Sbjct 523030 GTCGATCTCGACGGTAGTTTGCGCAGCGTTCGACAGGGTACGCTTGGCACGCTCGCAAGC 523089 Query 7363 CGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTT 7422 || || | ||||| |||||||| | | |||||||| ||| ||||| || || | Sbjct 523090 AGTCCGGAGCCGACGGAGGGCACGAGCATCACCGGAAAGATCCTTCTTCGTCTTGCGCTG 523149 Query 7423 AAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 ||||| | ||||||| | || | | || || || | |||||||||||| || Sbjct 523150 GAACTCCTTCTTGAAGTGTTCCAAAAGGTTGGTGTCAAAGTCCTGACCACCCAAGTGAGT 523209 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542 || || || || || || ||| || | ||| || | ||||| | | || ||||| Sbjct 523210 GTCACCAGCAGTGGCCTTAACTGTGAAAACACCACCCTGAATGTGAAGAAGGGACACATC 523269 Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT--CTTA 7600 || |||||||| ||||| || |||| || || ||| || | ||| || | | Sbjct 523270 GAAAGTACCACCGCCCAGATCGTAAATCAGCACATTCCGTTCCTTGTCCGACTTTCCGGA 523329 Query 7601 TCGA-GACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | |||| || || || || || ||||| || || || || ||||| || ||| || Sbjct 523330 CCCAAGACCATAAGCAATGGCAGCAGCCGTGGGCTCGTTGATGATACGGAGGACGTTGAG 523389 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||||||||| | | ||||| || || | ||| || || ||||| ||||| || || Sbjct 523390 GCCAGCAATGGCACCAGCATCCTTTGTGGATTGACGCTGGTTGTCGTTGAAGTAAGCGGG 523449 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||||| | ||| || | || ||| ||||| || || | | || || | |||||||| Sbjct 523450 CACCGTAATGACAGCCTTCGAGACCTTCTTTCCAAGCTTGGTCTCGGCAACTTCTTTCAT 523509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131458281960