Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq26 120 4e-22
seq82 116 5e-21
seq2 109 7e-19
seq57 105 8e-18
>seq26
Length=513936
Score = 120 bits (132), Expect = 4e-22
Identities = 226/326 (69%), Gaps = 21/326 (6%)
Strand=Plus/Minus
Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034
||||||||||| || ||||| | |||||| | ||| || || || ||||| | ||
Sbjct 306436 AAACCATCCATTTCCGTCAAGATCTGGTTGAGAGTGGCCTCTCGCTCGTCATTACC--GC 306379
Query 16035 ATACCACCAGCACTGCGTTG-------CTTTCCCACGGCATCAATCTCATCAATGAAGAC 16087
|||| || |||| | | |||||| | ||||||||||||||||||||| |
Sbjct 306378 -CACCA-AAGTTCTGCTTGGCTCTTGACTTTCCAATGGCATCAATCTCATCAATGAAAAT 306321
Query 16088 GATGCATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGC 16143
||||| || || | ||||| | | | |||||||| || || | | | |
Sbjct 306320 AATGCAAGGCGCATTTTTCTTCGCTCGGG----CGAAGAGATCGCGCACTCTCGAAGGAC 306265
Query 16144 CCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTA 16202
| ||||||||||||||||| || || | | | || || | || ||| ||||| |
Sbjct 306264 CAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGACGCT-GAAGAAAGGGACTCCA 306206
Query 16203 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 16262
||||||||||| ||||| ||| || | |||||||| ||||| || ||| | |||
Sbjct 306205 GATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGAGA 306146
Query 16263 AGGGCACCTCGTGGAATCTTGGCGCC 16288
| ||||||||| ||||||||||| ||
Sbjct 306145 ATGGCACCTCGAGGAATCTTGGCACC 306120
>seq82
Length=10320
Score = 116 bits (128), Expect = 5e-21
Identities = 250/367 (68%), Gaps = 10/367 (3%)
Strand=Plus/Plus
Query 112104 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 112163
|| |||| || ||| | ||||||||| | || ||| ||| | ||||| | |||||
Sbjct 1 CTATGGACCCCGGATTTGTTCATGAAGCGGGTCGAGAAGAATCAGGATTGGACACTCTTC 60
Query 112164 TGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCTC 112220
|| || | |||| || ||||| |||| |||| || || || || ||||||||
Sbjct 61 TGCCCCAATGAGGCTCCTGGTCTGGCCGA---CGTGTATGGCGATGAATTCGAAGCCCTT 117
Query 112221 TACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGT 112278
||| ||||| || | ||| | || ||| | | | | ||| | || | |||
Sbjct 118 TACGAGAAGTATGAAAAGGAAGGCCGTGGCCGCA-CATCTATCAAAGCC-CAGAAGCTGT 175
Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338
|| | || ||||| | ||||||| ||||| || | || | ||||||||||| || |
Sbjct 176 GGTACGCAATTCTGGAAGCTCAAACAGAGACCGGAAACCCCTTCATGCTTTACAAGGATG 235
Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398
| || |||| ||||| || || || ||| | ||| ||| || ||||| ||||| |
Sbjct 236 CTTGCAACCGCAAGAGCAACCAGAAAAATCTTGGTACTATCCGAAGCTCCAATCTCTGCA 295
Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458
| |||||| | |||| || | | ||||||| |||||||| ||||| || || ||||
Sbjct 296 CGGAAATCGTCGAATACACTGCCCCAGATGAGGTTGCTGTGTGCAACCTTGCTTCGATCG 355
Query 112459 CTCTCCC 112465
|||| ||
Sbjct 356 CTCTGCC 362
>seq2
Length=1065396
Score = 109 bits (120), Expect = 7e-19
Identities = 154/214 (72%), Gaps = 7/214 (3%)
Strand=Plus/Minus
Query 102104 CCAA-ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATA 102159
|||| ||||||||||| |||| || || || || ||||| || ||| | || |
Sbjct 669142 CCAATACAGTTCCATGCATTCGTAATAAGGCAGACTGGGCCATCCGATGGATACAAGACA 669083
Query 102160 CAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCT 102219
||| ||| |||| || | || ||| |||| |||||| ||| |||||||||||||
Sbjct 669082 AAAATTCGA---CCTTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCT 669026
Query 102220 TCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCT 102279
|| ||| || ||| | || | |||||| |||||||| || |||||||| || || |
Sbjct 669025 TCAGTGGCTCGTTCGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGT 668966
Query 102280 GCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313
||||| ||||| || || || ||||| |||||
Sbjct 668965 CTTTCTCGAACGAACTCATTTCACGTGATGAGGG 668932
>seq57
Length=16334
Score = 105 bits (116), Expect = 8e-18
Identities = 372/571 (65%), Gaps = 23/571 (4%)
Strand=Plus/Plus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||||||| ||||| |||||||||| || | | ||||| || |||||||| | |
Sbjct 15764 CCCACAGCACATGATCATGCGGGTGGCAGTGGAGATCCACGGTGAAGATATCCAAGGGGC 15823
Query 111671 TTTGGAGACATACGACAAGATGTCCCGT-GGTATGTTCATCCACGCAACACCAACCCTCT 111729
| || ||||| || ||||||| || || |||| || || |||| || || |
Sbjct 15824 AATCGAAACATATAACTTGATGTCCAACAGGCAT-TTCACTCATGCCTCACCCACTCTTT 15882
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
|||| ||||| || || | | || | || || ||||| || | | ||||| |
Sbjct 15883 TCAATGCTGGGACGCCTAATGCGCAGCTTGCCTCCTGCTTCCTCATCGACATGAAGGAAG 15942
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGG 111845
| || | || || |||| ||| || |||| |||||| ||||| |||
Sbjct 15943 ACAGCATTGAAGGTATSTACGACAC-CT---TGAAGACTTGTGCCATGATCTCCAAGACC 15998
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAG 111903
||||||||||| || | ||||||| || | |||| || || || || | ||
Sbjct 15999 GCTGGTGGTATTGGTCTCAACATCCACCGCATCCGCGCCA-CAGGT-TCATACATCTCAG 16056
Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963
| || |||||| || | ||||| |||| ||||||||||| || ||| || ||
Sbjct 16057 GAACTAATGGTTCCTCCAACGGTATCGTTCCGATGCTTCGCGTGTTCAACAATACCGCCA 16116
Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017
| || || |||||| ||| ||||| || | | || | || ||||||||||||
Sbjct 16117 GATACGTCGACCAAGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCTATCTATCTTGAGC 16173
Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077
| ||||| || ||| | | ||||| || || | || ||||| || | || || |
Sbjct 16174 CTTGGCATGCTGATGTGTTCGAGTTTCTCGACCTACGAAAGAACCACGGCAAAGAAGAAG 16233
Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137
|| ||| || || ||| ||| || |||| || ||| | ||||||||| | || |
Sbjct 16234 TTCGCGCCCGTGACCTATTCCTCGCYCTATGGACCCCGGATTTGTTCATGAAGCGGGTCG 16293
Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCC 112168
|| ||| | ||||| | ||||| || ||
Sbjct 16294 AGAAGAATCAGGATTGGACACTCTTCTGCCC 16324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741088681680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |