Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq26 120 4e-22 seq82 116 5e-21 seq2 109 7e-19 seq57 105 8e-18 >seq26 Length=513936 Score = 120 bits (132), Expect = 4e-22 Identities = 226/326 (69%), Gaps = 21/326 (6%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 ||||||||||| || ||||| | |||||| | ||| || || || ||||| | || Sbjct 306436 AAACCATCCATTTCCGTCAAGATCTGGTTGAGAGTGGCCTCTCGCTCGTCATTACC--GC 306379 Query 16035 ATACCACCAGCACTGCGTTG-------CTTTCCCACGGCATCAATCTCATCAATGAAGAC 16087 |||| || |||| | | |||||| | ||||||||||||||||||||| | Sbjct 306378 -CACCA-AAGTTCTGCTTGGCTCTTGACTTTCCAATGGCATCAATCTCATCAATGAAAAT 306321 Query 16088 GATGCATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGC 16143 ||||| || || | ||||| | | | |||||||| || || | | | | Sbjct 306320 AATGCAAGGCGCATTTTTCTTCGCTCGGG----CGAAGAGATCGCGCACTCTCGAAGGAC 306265 Query 16144 CCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTA 16202 | ||||||||||||||||| || || | | | || || | || ||| ||||| | Sbjct 306264 CAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGACGCT-GAAGAAAGGGACTCCA 306206 Query 16203 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 16262 ||||||||||| ||||| ||| || | |||||||| ||||| || ||| | ||| Sbjct 306205 GATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGAGA 306146 Query 16263 AGGGCACCTCGTGGAATCTTGGCGCC 16288 | ||||||||| ||||||||||| || Sbjct 306145 ATGGCACCTCGAGGAATCTTGGCACC 306120 >seq82 Length=10320 Score = 116 bits (128), Expect = 5e-21 Identities = 250/367 (68%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 112104 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 112163 || |||| || ||| | ||||||||| | || ||| ||| | ||||| | ||||| Sbjct 1 CTATGGACCCCGGATTTGTTCATGAAGCGGGTCGAGAAGAATCAGGATTGGACACTCTTC 60 Query 112164 TGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCTC 112220 || || | |||| || ||||| |||| |||| || || || || |||||||| Sbjct 61 TGCCCCAATGAGGCTCCTGGTCTGGCCGA---CGTGTATGGCGATGAATTCGAAGCCCTT 117 Query 112221 TACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGT 112278 ||| ||||| || | ||| | || ||| | | | | ||| | || | ||| Sbjct 118 TACGAGAAGTATGAAAAGGAAGGCCGTGGCCGCA-CATCTATCAAAGCC-CAGAAGCTGT 175 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | || ||||| | ||||||| ||||| || | || | ||||||||||| || | Sbjct 176 GGTACGCAATTCTGGAAGCTCAAACAGAGACCGGAAACCCCTTCATGCTTTACAAGGATG 235 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | || |||| ||||| || || || ||| | ||| ||| || ||||| ||||| | Sbjct 236 CTTGCAACCGCAAGAGCAACCAGAAAAATCTTGGTACTATCCGAAGCTCCAATCTCTGCA 295 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 | |||||| | |||| || | | ||||||| |||||||| ||||| || || |||| Sbjct 296 CGGAAATCGTCGAATACACTGCCCCAGATGAGGTTGCTGTGTGCAACCTTGCTTCGATCG 355 Query 112459 CTCTCCC 112465 |||| || Sbjct 356 CTCTGCC 362 >seq2 Length=1065396 Score = 109 bits (120), Expect = 7e-19 Identities = 154/214 (72%), Gaps = 7/214 (3%) Strand=Plus/Minus Query 102104 CCAA-ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATA 102159 |||| ||||||||||| |||| || || || || ||||| || ||| | || | Sbjct 669142 CCAATACAGTTCCATGCATTCGTAATAAGGCAGACTGGGCCATCCGATGGATACAAGACA 669083 Query 102160 CAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCT 102219 ||| ||| |||| || | || ||| |||| |||||| ||| ||||||||||||| Sbjct 669082 AAAATTCGA---CCTTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCT 669026 Query 102220 TCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCT 102279 || ||| || ||| | || | |||||| |||||||| || |||||||| || || | Sbjct 669025 TCAGTGGCTCGTTCGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGT 668966 Query 102280 GCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||| ||||| || || || ||||| ||||| Sbjct 668965 CTTTCTCGAACGAACTCATTTCACGTGATGAGGG 668932 >seq57 Length=16334 Score = 105 bits (116), Expect = 8e-18 Identities = 372/571 (65%), Gaps = 23/571 (4%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| |||||||||| || | | ||||| || |||||||| | | Sbjct 15764 CCCACAGCACATGATCATGCGGGTGGCAGTGGAGATCCACGGTGAAGATATCCAAGGGGC 15823 Query 111671 TTTGGAGACATACGACAAGATGTCCCGT-GGTATGTTCATCCACGCAACACCAACCCTCT 111729 | || ||||| || ||||||| || || |||| || || |||| || || | Sbjct 15824 AATCGAAACATATAACTTGATGTCCAACAGGCAT-TTCACTCATGCCTCACCCACTCTTT 15882 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 |||| ||||| || || | | || | || || ||||| || | | ||||| | Sbjct 15883 TCAATGCTGGGACGCCTAATGCGCAGCTTGCCTCCTGCTTCCTCATCGACATGAAGGAAG 15942 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGG 111845 | || | || || |||| ||| || |||| |||||| ||||| ||| Sbjct 15943 ACAGCATTGAAGGTATSTACGACAC-CT---TGAAGACTTGTGCCATGATCTCCAAGACC 15998 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAG 111903 ||||||||||| || | ||||||| || | |||| || || || || | || Sbjct 15999 GCTGGTGGTATTGGTCTCAACATCCACCGCATCCGCGCCA-CAGGT-TCATACATCTCAG 16056 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 | || |||||| || | ||||| |||| ||||||||||| || ||| || || Sbjct 16057 GAACTAATGGTTCCTCCAACGGTATCGTTCCGATGCTTCGCGTGTTCAACAATACCGCCA 16116 Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 | || || |||||| ||| ||||| || | | || | || |||||||||||| Sbjct 16117 GATACGTCGACCAAGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCTATCTATCTTGAGC 16173 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | ||||| || ||| | | ||||| || || | || ||||| || | || || | Sbjct 16174 CTTGGCATGCTGATGTGTTCGAGTTTCTCGACCTACGAAAGAACCACGGCAAAGAAGAAG 16233 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || ||| || || ||| ||| || |||| || ||| | ||||||||| | || | Sbjct 16234 TTCGCGCCCGTGACCTATTCCTCGCYCTATGGACCCCGGATTTGTTCATGAAGCGGGTCG 16293 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCC 112168 || ||| | ||||| | ||||| || || Sbjct 16294 AGAAGAATCAGGATTGGACACTCTTCTGCCC 16324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741088681680