Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 6e-26
seq57 114 2e-20
seq82 105 8e-18
seq26 95.1 1e-14
>seq2
Length=1065396
Score = 132 bits (146), Expect = 6e-26
Identities = 307/456 (67%), Gaps = 5/456 (1%)
Strand=Plus/Plus
Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266
||||||||| |||||||| |||||||| || ||||| || | | |||||| | |||||
Sbjct 668625 ATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGCCAATGAGATACTCTCCAT 668684
Query 119267 AAAGTCAAAAGGATTTTTGGAGTTCCAGA-TTGGTGGTTGACCAACTTGTTTCAGAAGAC 119325
||||| |||||||| || | || || |||||| |||| || || |
Sbjct 668685 GAAGTCGAAAGGATTGGCCGAATGGTAGTGTTTCTGGTTG-CCAAGCGCAACGAGCAGGC 668743
Query 119326 GATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTAC 119385
|||| | || ||||||| |||| |||| | |||||||| |||| ||| ||
Sbjct 668744 GATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATTCATCCCTAGCAGAGCAC 668803
Query 119386 ACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445
| || ||||| || | || |||| ||||||| |||||| || | | || | |
Sbjct 668804 ATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCACAGCCTCGGTGATAATAGCGA 668863
Query 119446 GAATAGTTTCTGTCGATGGTTTG-TTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCT 119504
|||||| || | | ||| | ||||||||| | || | | ||||| ||
Sbjct 668864 GAATAGCAGCT-TGGCTGGGGCGGTTTCTCAAGTGCGAGAAGAGCAAACAAGCAAAGTCA 668922
Query 119505 TGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564
||| | ||| ||||| || || ||||| || || ||| | ||||||||||||||
Sbjct 668923 GTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGGCATGAGG 668982
Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624
|| | ||||| ||||||||||||| | || ||| |||||||| |||||||||
Sbjct 668983 CCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACCCTCCACA 669042
Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA 119660
|| ||||||| || || | || ||||||||
Sbjct 669043 GCCGCAAAAGCGACGAGGCGTTGTGC-GAAGGTCGA 669077
>seq57
Length=16334
Score = 114 bits (126), Expect = 2e-20
Identities = 369/566 (65%), Gaps = 15/566 (3%)
Strand=Plus/Minus
Query 110569 GCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628
|||| | ||| |||||||| | ||||| | || ||| |||| |||||||||||
Sbjct 16333 GCCTCATTGGGGCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAA 16274
Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688
|| || |||| | || ||| ||||||||| ||| | ||||| | || |||||
Sbjct 16273 TCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACTTCTTCTTTGCCGTGGTTC 16214
Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-- 110746
||||| || | ||| || | | ||| | ||||| || || ||||||| ||| |
Sbjct 16213 TTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGCTCAAGATAGATAGCAAAA 16154
Query 110747 -----TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801
|||| | ||| | ||| |||| || || | || || ||||| ||
Sbjct 16153 GCACCTGGA-CGCTTGTTGCCACCT---TGGTCGACGTATCTGGCGGTATTGTTGAACAC 16098
Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTAT 110860
| ||||| |||| || || | ||| |||||| || || || | || || | |
Sbjct 16097 GCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAGATGTATGAACCTGT 16038
Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920
||| || ||| |||||| | | |||||||||||| || ||| || ||||
Sbjct 16037 -GGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTGGAGATCATGGCAC 15979
Query 110921 -ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979
| ||| | | || | || ||||| ||||| ||| |||| || | || || |||
Sbjct 15978 AAGTCT-TCAAGGTGTCGTASATACCTTCAATGCTGTCTTCCTTCATGTCGATGAGGAAG 15920
Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039
|| || | | ||| | | |||||| || |||||||| || || |||| |||||| ||
Sbjct 15919 CAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGAGTGGGTGAGGCATGAGTG 15860
Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099
|| | | | ||||||| ||| ||||| |||| ||| | | ||||| ||||||
Sbjct 15859 AAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTTGGATATCTTCACCGTGG 15800
Query 111100 ATACCAATGGCAACTCGCATGAACAT 111125
|| | | || || ||||||| |||
Sbjct 15799 ATCTCCACTGCCACCCGCATGATCAT 15774
>seq82
Length=10320
Score = 105 bits (116), Expect = 8e-18
Identities = 241/360 (67%), Gaps = 2/360 (1%)
Strand=Plus/Minus
Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340
|| ||||| || || ||||| |||||||||| | ||| ||| | | |||||||| |
Sbjct 362 GGCAGAGCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACG 303
Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400
|||||||| || | ||||| || || ||| | || ||||| || ||| |
Sbjct 302 ATTTCCGTGCAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGG 243
Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460
||||| |||||||| || |||||| | ||| | || || || || || | | |||||
Sbjct 242 TTGCAAGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATT 183
Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519
|| | ||| | | || | ||| || || || | | | ||||||| || |||||
Sbjct 182 GCGTACCACAGCTTCTG-GGCTTTGATAGATGTGCGGCCACGGCCTTCCTTTTCATACTT 124
Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579
||| | | | || ||||| | || ||||| || | ||||| |||| | |||
Sbjct 123 CTCGTAAAGGGCTTCGAATTCATCGCCATACACGTCGGCCAGACCAGGAGCCTCATTGGG 64
Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639
|||||||| | ||||| | || ||| |||| ||||||||||| || || ||||
Sbjct 63 GCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCA 4
>seq26
Length=513936
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/148 (76%), Gaps = 4/148 (3%)
Strand=Plus/Minus
Query 11761 CCAACACCTACGAACATCTCAACGAAGTTTGCG--GCAGAACACTGAATGAAGGGAACAT 11818
|||||||| || |||||||| ||||| | | | || || | ||||| |||||| |
Sbjct 306265 CCAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGA-CGCTGAAGAAAGGGA-CTC 306208
Query 11819 TAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGA 11878
||| ||||| ||| ||||| || || | |||||||| |||||||||| ||||| ||
Sbjct 306207 CAGATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGA 306148
Query 11879 GAAGGGCGCCACGGGGGATCTTGGCACC 11906
||| ||| || || || |||||||||||
Sbjct 306147 GAATGGCACCTCGAGGAATCTTGGCACC 306120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974755788200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |