Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 132 6e-26 seq57 114 2e-20 seq82 105 8e-18 seq26 95.1 1e-14 >seq2 Length=1065396 Score = 132 bits (146), Expect = 6e-26 Identities = 307/456 (67%), Gaps = 5/456 (1%) Strand=Plus/Plus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266 ||||||||| |||||||| |||||||| || ||||| || | | |||||| | ||||| Sbjct 668625 ATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGCCAATGAGATACTCTCCAT 668684 Query 119267 AAAGTCAAAAGGATTTTTGGAGTTCCAGA-TTGGTGGTTGACCAACTTGTTTCAGAAGAC 119325 ||||| |||||||| || | || || |||||| |||| || || | Sbjct 668685 GAAGTCGAAAGGATTGGCCGAATGGTAGTGTTTCTGGTTG-CCAAGCGCAACGAGCAGGC 668743 Query 119326 GATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTAC 119385 |||| | || ||||||| |||| |||| | |||||||| |||| ||| || Sbjct 668744 GATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATTCATCCCTAGCAGAGCAC 668803 Query 119386 ACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445 | || ||||| || | || |||| ||||||| |||||| || | | || | | Sbjct 668804 ATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCACAGCCTCGGTGATAATAGCGA 668863 Query 119446 GAATAGTTTCTGTCGATGGTTTG-TTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCT 119504 |||||| || | | ||| | ||||||||| | || | | ||||| || Sbjct 668864 GAATAGCAGCT-TGGCTGGGGCGGTTTCTCAAGTGCGAGAAGAGCAAACAAGCAAAGTCA 668922 Query 119505 TGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564 ||| | ||| ||||| || || ||||| || || ||| | |||||||||||||| Sbjct 668923 GTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGGCATGAGG 668982 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 || | ||||| ||||||||||||| | || ||| |||||||| ||||||||| Sbjct 668983 CCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACCCTCCACA 669042 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA 119660 || ||||||| || || | || |||||||| Sbjct 669043 GCCGCAAAAGCGACGAGGCGTTGTGC-GAAGGTCGA 669077 >seq57 Length=16334 Score = 114 bits (126), Expect = 2e-20 Identities = 369/566 (65%), Gaps = 15/566 (3%) Strand=Plus/Minus Query 110569 GCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628 |||| | ||| |||||||| | ||||| | || ||| |||| ||||||||||| Sbjct 16333 GCCTCATTGGGGCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAA 16274 Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688 || || |||| | || ||| ||||||||| ||| | ||||| | || ||||| Sbjct 16273 TCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACTTCTTCTTTGCCGTGGTTC 16214 Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-- 110746 ||||| || | ||| || | | ||| | ||||| || || ||||||| ||| | Sbjct 16213 TTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGCTCAAGATAGATAGCAAAA 16154 Query 110747 -----TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801 |||| | ||| | ||| |||| || || | || || ||||| || Sbjct 16153 GCACCTGGA-CGCTTGTTGCCACCT---TGGTCGACGTATCTGGCGGTATTGTTGAACAC 16098 Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTAT 110860 | ||||| |||| || || | ||| |||||| || || || | || || | | Sbjct 16097 GCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAGATGTATGAACCTGT 16038 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 ||| || ||| |||||| | | |||||||||||| || ||| || |||| Sbjct 16037 -GGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTGGAGATCATGGCAC 15979 Query 110921 -ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979 | ||| | | || | || ||||| ||||| ||| |||| || | || || ||| Sbjct 15978 AAGTCT-TCAAGGTGTCGTASATACCTTCAATGCTGTCTTCCTTCATGTCGATGAGGAAG 15920 Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039 || || | | ||| | | |||||| || |||||||| || || |||| |||||| || Sbjct 15919 CAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGAGTGGGTGAGGCATGAGTG 15860 Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099 || | | | ||||||| ||| ||||| |||| ||| | | ||||| |||||| Sbjct 15859 AAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTTGGATATCTTCACCGTGG 15800 Query 111100 ATACCAATGGCAACTCGCATGAACAT 111125 || | | || || ||||||| ||| Sbjct 15799 ATCTCCACTGCCACCCGCATGATCAT 15774 >seq82 Length=10320 Score = 105 bits (116), Expect = 8e-18 Identities = 241/360 (67%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| || || ||||| |||||||||| | ||| ||| | | |||||||| | Sbjct 362 GGCAGAGCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACG 303 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 |||||||| || | ||||| || || ||| | || ||||| || ||| | Sbjct 302 ATTTCCGTGCAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGG 243 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||||| |||||||| || |||||| | ||| | || || || || || | | ||||| Sbjct 242 TTGCAAGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATT 183 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 || | ||| | | || | ||| || || || | | | ||||||| || ||||| Sbjct 182 GCGTACCACAGCTTCTG-GGCTTTGATAGATGTGCGGCCACGGCCTTCCTTTTCATACTT 124 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 ||| | | | || ||||| | || ||||| || | ||||| |||| | ||| Sbjct 123 CTCGTAAAGGGCTTCGAATTCATCGCCATACACGTCGGCCAGACCAGGAGCCTCATTGGG 64 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 |||||||| | ||||| | || ||| |||| ||||||||||| || || |||| Sbjct 63 GCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCA 4 >seq26 Length=513936 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/148 (76%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 11761 CCAACACCTACGAACATCTCAACGAAGTTTGCG--GCAGAACACTGAATGAAGGGAACAT 11818 |||||||| || |||||||| ||||| | | | || || | ||||| |||||| | Sbjct 306265 CCAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGA-CGCTGAAGAAAGGGA-CTC 306208 Query 11819 TAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGA 11878 ||| ||||| ||| ||||| || || | |||||||| |||||||||| ||||| || Sbjct 306207 CAGATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGA 306148 Query 11879 GAAGGGCGCCACGGGGGATCTTGGCACC 11906 ||| ||| || || || ||||||||||| Sbjct 306147 GAATGGCACCTCGAGGAATCTTGGCACC 306120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974755788200