Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq26 118 1e-21
seq82 114 2e-20
seq57 109 6e-19
seq2 102 1e-16
>seq26
Length=513936
Score = 118 bits (130), Expect = 1e-21
Identities = 226/328 (69%), Gaps = 25/328 (8%)
Strand=Plus/Minus
Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341
||||||||||| || ||||| | ||||| | ||| || || || ||||| | ||
Sbjct 306436 AAACCATCCATTTCCGTCAAGATCTGGTTGAGAGTGGCCTCTCGCTCGTCATTACC--GC 306379
Query 9342 ATACCACCAGCACTGCGTTG-------CTTTCCCACGGCATCAATCTCATCAATGAAGAC 9394
|||| || |||| | | |||||| | ||||||||||||||||||||| |
Sbjct 306378 -CACCA-AAGTTCTGCTTGGCTCTTGACTTTCCAATGGCATCAATCTCATCAATGAAAAT 306321
Query 9395 AATACATGGTTGATTTT------CGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGC 9448
||| || || ||||| | |||||| ||||||||||| || || |
Sbjct 306320 AATGCAAGGCGCATTTTTCTTCGCTCGGGCG------AAGAGATCGCGCACTCTCGAAGG 306267
Query 9449 GCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACAT 9507
|| ||||||||||||||||| || || | | | || || | || ||| |||||
Sbjct 306266 ACCAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGACGCT-GAAGAAAGGGACTC 306208
Query 9508 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 9567
|||||||||||| ||||| ||| || | |||||||| ||||| || ||| | ||
Sbjct 306207 CAGATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGA 306148
Query 9568 GGAGGGCACCCCGTGGAATCTTGGCGCC 9595
| | |||||| || ||||||||||| ||
Sbjct 306147 GAATGGCACCTCGAGGAATCTTGGCACC 306120
>seq82
Length=10320
Score = 114 bits (126), Expect = 2e-20
Identities = 247/365 (68%), Gaps = 6/365 (2%)
Strand=Plus/Minus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
|| || ||||| || || | ||||| ||||| |||||| | ||||| || |
Sbjct 362 GGCAGAGCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACG 303
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
||||| || || | ||||| || || || || | ||| || ||||| ||||| |
Sbjct 302 ATTTCCGTGCAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGG 243
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
||||| ||||||||||| |||||| |||| | || ||||| || || | | ||||||
Sbjct 242 TTGCAAGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATT 183
Query 106637 GCCTTCCACA-CATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693
|| | ||||| | || | ||| || || | ||| | | || || ||| || |||
Sbjct 182 GCGTACCACAGCTTCTG-GGCTTTGATAGATGTGCG--GCCACGGCCTTCCTTTTCATAC 126
Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753
|| ||| |||||||| || || || || | |||||| ||||| || |||| |
Sbjct 125 TTCTCGTAAAGGGCTTCGAATTCATCGCCATACACGTCGGCCAGACCAGGAGCCTCATTG 66
Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813
|| ||||| || | ||| | | || ||| |||||||||||||| | || || ||
Sbjct 65 GGGCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTC 6
Query 106814 CACAG 106818
|| ||
Sbjct 5 CATAG 1
>seq57
Length=16334
Score = 109 bits (120), Expect = 6e-19
Identities = 347/538 (64%), Gaps = 25/538 (5%)
Strand=Plus/Minus
Query 106780 CTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 106839
|| ||| |||||||||||||| | || || |||| || | || || || |
Sbjct 16298 CTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGC 16239
Query 106840 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 106899
||| | ||||| | || ||||| ||||| || || ||||| | | ||| || ||
Sbjct 16238 GCGAACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATG 16179
Query 106900 CCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTAC 106953
||| ||||||||||||| || | || || | ||||| ||| |||| | ||
Sbjct 16178 CCAAGGCTCAAGATAGATAGCAAAAGCACC---TGGACGCTTGTTGCCACCTTGGTCGAC 16122
Query 106954 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 107013
|| | || || ||| || ||||||||||| |||| ||||| | || ||||||
Sbjct 16121 GTATCTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATT 16062
Query 107014 TGTCCCCCGAATACGAGATTTAT-------TGGCTCTCACATCATGGATGTGCATCCCAA 107066
|| || ||||| ||| |||| | | ||||||| | ||||
Sbjct 16061 AGTTCCT-------GAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAA 16009
Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126
|||| ||||| ||| ||||| ||||| | | | || | || ||||| | |
Sbjct 16008 TACCACCAGCGGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAA 15949
Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186
| ||| ||||| || |||| |||||||| || | ||||| | || || ||||
Sbjct 15948 TGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAG 15889
Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTC 107245
||||||| || || |||| || ||| |||| || ||| | ||||||| || |||||
Sbjct 15888 CATTGAAAAGAGTGGGTGAGGCATGAGTGAA-ATGCCTGTTGGACATCAAGTTATATGTT 15830
Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
|| | | | || ||||| |||||||| | | ||||| ||||| | |||||
Sbjct 15829 TCGATTGCCCCTTGGATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGT 15772
>seq2
Length=1065396
Score = 102 bits (112), Expect = 1e-16
Identities = 152/212 (72%), Gaps = 3/212 (1%)
Strand=Plus/Plus
Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351
|||||||| || ||||| ||||| || ||||| | || || |||||||| || ||||||
Sbjct 668932 CCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGGCATGAGGCCACGCTTC 668991
Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411
|| | |||| | || | ||| || || ||||||||||||||||||| ||||||
Sbjct 668992 TTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACCCTCCACAGCCGCAAAA 669051
Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCCATTT 117470
|| | ||||| | ||||||| ||| ||||| | | |||| || ||||| |
Sbjct 669052 GCGACGAGGCGTTGTGCGAAGG-TCGAATTTTTGTCTTGTATCCATCGGATGGCCCAGTC 669110
Query 117471 CGCCTTCTTCTCAATACATGGTACAGT-TTGG 117501
||||| || ||| ||||| || || ||||
Sbjct 669111 TGCCTTATTACGAATGCATGGAACTGTATTGG 669142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979553665560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |