Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq26 118 1e-21 seq82 114 2e-20 seq57 109 6e-19 seq2 102 1e-16 >seq26 Length=513936 Score = 118 bits (130), Expect = 1e-21 Identities = 226/328 (69%), Gaps = 25/328 (8%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 ||||||||||| || ||||| | ||||| | ||| || || || ||||| | || Sbjct 306436 AAACCATCCATTTCCGTCAAGATCTGGTTGAGAGTGGCCTCTCGCTCGTCATTACC--GC 306379 Query 9342 ATACCACCAGCACTGCGTTG-------CTTTCCCACGGCATCAATCTCATCAATGAAGAC 9394 |||| || |||| | | |||||| | ||||||||||||||||||||| | Sbjct 306378 -CACCA-AAGTTCTGCTTGGCTCTTGACTTTCCAATGGCATCAATCTCATCAATGAAAAT 306321 Query 9395 AATACATGGTTGATTTT------CGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGC 9448 ||| || || ||||| | |||||| ||||||||||| || || | Sbjct 306320 AATGCAAGGCGCATTTTTCTTCGCTCGGGCG------AAGAGATCGCGCACTCTCGAAGG 306267 Query 9449 GCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACAT 9507 || ||||||||||||||||| || || | | | || || | || ||| ||||| Sbjct 306266 ACCAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGACGCT-GAAGAAAGGGACTC 306208 Query 9508 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 9567 |||||||||||| ||||| ||| || | |||||||| ||||| || ||| | || Sbjct 306207 CAGATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGA 306148 Query 9568 GGAGGGCACCCCGTGGAATCTTGGCGCC 9595 | | |||||| || ||||||||||| || Sbjct 306147 GAATGGCACCTCGAGGAATCTTGGCACC 306120 >seq82 Length=10320 Score = 114 bits (126), Expect = 2e-20 Identities = 247/365 (68%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || || ||||| || || | ||||| ||||| |||||| | ||||| || | Sbjct 362 GGCAGAGCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACG 303 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 ||||| || || | ||||| || || || || | ||| || ||||| ||||| | Sbjct 302 ATTTCCGTGCAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGG 243 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| |||||| |||| | || ||||| || || | | |||||| Sbjct 242 TTGCAAGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATT 183 Query 106637 GCCTTCCACA-CATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693 || | ||||| | || | ||| || || | ||| | | || || ||| || ||| Sbjct 182 GCGTACCACAGCTTCTG-GGCTTTGATAGATGTGCG--GCCACGGCCTTCCTTTTCATAC 126 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 || ||| |||||||| || || || || | |||||| ||||| || |||| | Sbjct 125 TTCTCGTAAAGGGCTTCGAATTCATCGCCATACACGTCGGCCAGACCAGGAGCCTCATTG 66 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||| || | ||| | | || ||| |||||||||||||| | || || || Sbjct 65 GGGCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTC 6 Query 106814 CACAG 106818 || || Sbjct 5 CATAG 1 >seq57 Length=16334 Score = 109 bits (120), Expect = 6e-19 Identities = 347/538 (64%), Gaps = 25/538 (5%) Strand=Plus/Minus Query 106780 CTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 106839 || ||| |||||||||||||| | || || |||| || | || || || | Sbjct 16298 CTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGC 16239 Query 106840 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 106899 ||| | ||||| | || ||||| ||||| || || ||||| | | ||| || || Sbjct 16238 GCGAACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATG 16179 Query 106900 CCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTAC 106953 ||| ||||||||||||| || | || || | ||||| ||| |||| | || Sbjct 16178 CCAAGGCTCAAGATAGATAGCAAAAGCACC---TGGACGCTTGTTGCCACCTTGGTCGAC 16122 Query 106954 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 107013 || | || || ||| || ||||||||||| |||| ||||| | || |||||| Sbjct 16121 GTATCTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATT 16062 Query 107014 TGTCCCCCGAATACGAGATTTAT-------TGGCTCTCACATCATGGATGTGCATCCCAA 107066 || || ||||| ||| |||| | | ||||||| | |||| Sbjct 16061 AGTTCCT-------GAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAA 16009 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| ||||| ||| ||||| ||||| | | | || | || ||||| | | Sbjct 16008 TACCACCAGCGGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAA 15949 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 | ||| ||||| || |||| |||||||| || | ||||| | || || |||| Sbjct 15948 TGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAG 15889 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTC 107245 ||||||| || || |||| || ||| |||| || ||| | ||||||| || ||||| Sbjct 15888 CATTGAAAAGAGTGGGTGAGGCATGAGTGAA-ATGCCTGTTGGACATCAAGTTATATGTT 15830 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || | | | || ||||| |||||||| | | ||||| ||||| | ||||| Sbjct 15829 TCGATTGCCCCTTGGATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGT 15772 >seq2 Length=1065396 Score = 102 bits (112), Expect = 1e-16 Identities = 152/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| || ||||| ||||| || ||||| | || || |||||||| || |||||| Sbjct 668932 CCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGGCATGAGGCCACGCTTC 668991 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 || | |||| | || | ||| || || ||||||||||||||||||| |||||| Sbjct 668992 TTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACCCTCCACAGCCGCAAAA 669051 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCCATTT 117470 || | ||||| | ||||||| ||| ||||| | | |||| || ||||| | Sbjct 669052 GCGACGAGGCGTTGTGCGAAGG-TCGAATTTTTGTCTTGTATCCATCGGATGGCCCAGTC 669110 Query 117471 CGCCTTCTTCTCAATACATGGTACAGT-TTGG 117501 ||||| || ||| ||||| || || |||| Sbjct 669111 TGCCTTATTACGAATGCATGGAACTGTATTGG 669142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979553665560