Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq15 122 6e-23 >seq15 Length=722239 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || ||||| ||||| ||||| ||||| | || |||| ||| Sbjct 456601 ACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCATCCTCC 456660 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | |||||||| || | Sbjct 456661 AGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTTATCTTGA 456720 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | |||| ||| | || || |||| ||| || ||||| Sbjct 456721 ATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACCTCGAGGGTAATCGTTTTC 456780 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || |||||||| || |||||||||||| Sbjct 456781 CCAGTCAGAGTCTTGACGAAGATCTGCATA 456810 Score = 95.1 bits (104), Expect = 8e-15 Identities = 153/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATC 34831 |||||||| | ||||| || ||||||||||| ||||| | || | | || |||| || Sbjct 456829 ACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATG-TACGGCCATCCTC 456887 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||| || || || || | || ||||||||| | || | ||||||||||| Sbjct 456888 CAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTG 456947 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| || | ||||| || || ||||| || | || || | Sbjct 456948 GATCTTGGATTTGAC--AT--TGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCG 457003 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || |||||||| || ||||| |||||| Sbjct 457004 TCTTGCCGGTCAGAGTCTTGACGAAGATTTGCATA 457038 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| ||||| || ||| | || |||| || ||||| || || || || Sbjct 457074 TTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAA 457133 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| |||| | || |||||||| ||||||| || || | Sbjct 457134 GATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCGACTTCAC--A 457191 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| || | ||| || || | || || || || ||||| || |||| Sbjct 457192 T--TGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGTCT 457249 Query 34966 TCACAAAGATCTGCATA 34982 | || |||||||||||| Sbjct 457250 TAACGAAGATCTGCATA 457266 Score = 82.4 bits (90), Expect = 5e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| ||||| || ||| | || |||| || || ||||| ||||| || Sbjct 457302 TTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAA 457361 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | ||||||||||| | || | || |||||||| |||||| || || Sbjct 457362 GATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCTTGAATCTTTGACTTCACATT 457421 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || | ||| || || | ||| ||||| || || ||||||||||| || Sbjct 457422 GTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGAC 457481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632931356232