Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq57 95.1 1e-14 seq2 86.0 7e-12 >seq57 Length=16334 Score = 95.1 bits (104), Expect = 1e-14 Identities = 191/284 (67%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 48165 TCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCT 48224 ||||| || || | | || |||||||| || || | || | |||| || | ||| Sbjct 16330 TCATTGGGGCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCC 16271 Query 48225 GGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTT 48284 || |||| || || | |||| || | | | | |||||| ||||| ||| || Sbjct 16270 GGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACTTCTTCTTTGCCGTGGTTCTTT 16211 Query 48285 TTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACA 48344 || || ||||| || | | |||||||||||| || || | ||| || || | || Sbjct 16210 CGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGCTCAAGATAGATAGCAAAAGCA 16151 Query 48345 CCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAAC 48404 ||||| || || || || ||||| || | |||||||| |||||||| | || | | | Sbjct 16150 CCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGCGGTATTGTTGAACACGCGAAGC 16091 Query 48405 ATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448 || || || ||||| || || |||||| ||||| || || || Sbjct 16090 ATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAGATGTA 16047 >seq2 Length=1065396 Score = 86.0 bits (94), Expect = 7e-12 Identities = 177/260 (68%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || ||||| || || || || ||||| || ||||| ||||| | || || | ||| Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 || || || | | ||||||||||| | ||| || || || || || ||| ||| || Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383 Query 19381 AAAAATGCTAATACATGTTTAATAAAAT---GTTTTTCATC--TGAGGTTAATG-TATTC 19434 || || || | ||||| || || | ||| ||||| |||| | | ||||| Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAG---ACGGTTATTC 669440 Query 19435 CAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCT 19494 || || | | ||||| || | ||| | |||||| | |||||||| || ||||| || Sbjct 669441 CAGTCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCC 669500 Query 19495 TTTTTATACATGTTCCATAT 19514 || |||||||| | |||||| Sbjct 669501 TTCTTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107612545160