Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq17 96.9 3e-14 seq15 95.1 1e-13 >seq17 Length=698222 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || ||||| || || ||||| ||||||||||| || || || ||||| | || Sbjct 468923 ACAGTTCCCGCATACTTCAACGACTCGCAACGTCAAGCCACCAAGGACGCTGGTCTCATC 468982 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || | || ||||||||||| ||||| |||||||| || ||||| | ||||| || Sbjct 468983 GCCGGTTTGAACGTTCTTCGTATCATCAACGAACCTACCGCCGCTGCCATCGCATACGGT 469042 Query 550529 CTTGATAA 550536 ||||| || Sbjct 469043 CTTGACAA 469050 >seq15 Length=722239 Score = 95.1 bits (104), Expect = 1e-13 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || || | || |||||||| || || || ||||| || | ||||| | Sbjct 456591 GAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAAAGAGTACG 456650 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| || || || || || || || || | || ||||| || ||||| || || || Sbjct 456651 GCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACCCTC 456710 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||||||||| ||| ||| || ||||| ||||||| || | | ||||| | Sbjct 456711 CTTATCTTGAATCTTTGATTTGACGTTGTCAATCGTATCAG-AAGATTCGACCTCGAGGG 456769 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| ||||| ||||| ||||| || ||||| || |||||| Sbjct 456770 TAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCATA 456810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029287062517810