Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 3e-25
seq57 91.5 3e-13
>seq2
Length=1065396
Score = 131 bits (144), Expect = 3e-25
Identities = 345/520 (66%), Gaps = 19/520 (4%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|| ||||| || || || ||||| |||||||| ||||| || |||| ||||| |||||
Sbjct 668623 TGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGCCAATGAGATACTCTCC 668682
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG---CCCATCTGTTCCAGC 47956
|||||| ||| || |||| | | || || || || || | | | |||
Sbjct 668683 ATGAAGTCGAAAGGATTGGCCGAATGGTAGT---GTTTCTGGTTGCCAAGCGCAACGAGC 668739
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
||| |||| || ||| |||||||||||| ||| | | || ||||| |||| ||
Sbjct 668740 AGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATTCATCCCTAGCAGA 668799
Query 48017 GACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
| ||| |||| ||||| || | ||| | || ||| ||| ||| || || | |||
Sbjct 668800 G-CACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCACAGCCTCGGTGATAAT 668858
Query 48076 CT---GCTTAAC-GCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
| || | || | || | ||||| | || |||| | |||||| |
Sbjct 668859 AGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCT----CAAGTGCGAGA---AGAGCAAAC 668911
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
| |||||||| | |||| || || || || ||||| |||| ||||| | || |
Sbjct 668912 AAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTC 668971
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
||||||||| || | || || ||||| || || | ||||| |||||| ||||||||
Sbjct 668972 CAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGA 669031
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
| |||||||| ||||| || ||| ||| | | | |||| | | || |||||| |
Sbjct 669032 TACCCTCCACAGCCGCAAAAGCGACGAGGCGTTGTGCGAAGGTCGAATTTTTGTCTTGTA 669091
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|||| | |||||||||||||| || ||||||||
Sbjct 669092 TCCATCGGATGGCCCAGTCTGCCTTATTACGAATGCATGG 669131
Score = 109 bits (120), Expect = 1e-18
Identities = 180/259 (69%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
||||||| || | ||||| || ||||||||||||||||| | |||||| |
Sbjct 669262 TCTCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAA 669321
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| || ||| | |||||| || | |||||||| || || || || || |||||||
Sbjct 669322 TCTGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAG 669381
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCC 48605
| ||||||||||||||||| | ||| | ||| || | | | ||||| |||||
Sbjct 669382 CGAAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCC 669441
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | ||||||| || || | ||||| ||||||| ||||| || || |
Sbjct 669442 AGTCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCT 669501
Query 48666 TTTTGTACATGCCCCATAT 48684
| || ||||| ||||||
Sbjct 669502 TCTTATACATCTGCCATAT 669520
>seq57
Length=16334
Score = 91.5 bits (100), Expect = 3e-13
Identities = 283/437 (65%), Gaps = 4/437 (1%)
Strand=Plus/Minus
Query 213804 TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTG 213863
|| |||| ||| | || |||||||| |||||| ||| || ||| ||| ||||| | |
Sbjct 16299 TCTTCTC-GACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGG 16241
Query 213864 GTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCG 213923
| | || || || ||| || || || || ||||| || || | || ||
Sbjct 16240 GCGCGAACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCA 16181
Query 213924 TGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACC 213980
||||| ||||| | ||||| ||||| || || || | |||| || || ||||| ||
Sbjct 16180 TGCCAAGGCTCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACG 16121
Query 213981 AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTG 214040
||||| ||||||| | ||| || | || || | |||||||| || ||
Sbjct 16120 TATCTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTA 16061
Query 214041 GTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCG 214100
||||| | || || || || | ||| | | | | ||| ||| || || |||||
Sbjct 16060 GTTCCTGAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCA 16001
Query 214101 GCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCA 214160
||| ||||||||||||||| || | ||| || || || || | ||||||||
Sbjct 16000 GCGGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCT 15941
Query 214161 TCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAA 214220
|| | | || | | ||||||| | ||||| | | | || |||| ||||||
Sbjct 15940 TCCTTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAA 15881
Query 214221 AGCGTGGGGCTGGCATG 214237
|| ||||| ||||||
Sbjct 15880 AGAGTGGGTGAGGCATG 15864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530832136960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |