Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 131 3e-25 seq57 91.5 3e-13 >seq2 Length=1065396 Score = 131 bits (144), Expect = 3e-25 Identities = 345/520 (66%), Gaps = 19/520 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 || ||||| || || || ||||| |||||||| ||||| || |||| ||||| ||||| Sbjct 668623 TGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGCCAATGAGATACTCTCC 668682 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG---CCCATCTGTTCCAGC 47956 |||||| ||| || |||| | | || || || || || | | | ||| Sbjct 668683 ATGAAGTCGAAAGGATTGGCCGAATGGTAGT---GTTTCTGGTTGCCAAGCGCAACGAGC 668739 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| |||| || ||| |||||||||||| ||| | | || ||||| |||| || Sbjct 668740 AGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATTCATCCCTAGCAGA 668799 Query 48017 GACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 | ||| |||| ||||| || | ||| | || ||| ||| ||| || || | ||| Sbjct 668800 G-CACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCACAGCCTCGGTGATAAT 668858 Query 48076 CT---GCTTAAC-GCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 | || | || | || | ||||| | || |||| | |||||| | Sbjct 668859 AGCGAGAATAGCAGCTTGGCTGGGGCGGTTTCT----CAAGTGCGAGA---AGAGCAAAC 668911 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | |||||||| | |||| || || || || ||||| |||| ||||| | || | Sbjct 668912 AAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTC 668971 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||||| || | || || ||||| || || | ||||| |||||| |||||||| Sbjct 668972 CAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGA 669031 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | |||||||| ||||| || ||| ||| | | | |||| | | || |||||| | Sbjct 669032 TACCCTCCACAGCCGCAAAAGCGACGAGGCGTTGTGCGAAGGTCGAATTTTTGTCTTGTA 669091 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||| | |||||||||||||| || |||||||| Sbjct 669092 TCCATCGGATGGCCCAGTCTGCCTTATTACGAATGCATGG 669131 Score = 109 bits (120), Expect = 1e-18 Identities = 180/259 (69%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 ||||||| || | ||||| || ||||||||||||||||| | |||||| | Sbjct 669262 TCTCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAA 669321 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || ||| | |||||| || | |||||||| || || || || || ||||||| Sbjct 669322 TCTGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAG 669381 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCC 48605 | ||||||||||||||||| | ||| | ||| || | | | ||||| ||||| Sbjct 669382 CGAAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCC 669441 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | ||||||| || || | ||||| ||||||| ||||| || || | Sbjct 669442 AGTCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCT 669501 Query 48666 TTTTGTACATGCCCCATAT 48684 | || ||||| |||||| Sbjct 669502 TCTTATACATCTGCCATAT 669520 >seq57 Length=16334 Score = 91.5 bits (100), Expect = 3e-13 Identities = 283/437 (65%), Gaps = 4/437 (1%) Strand=Plus/Minus Query 213804 TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTG 213863 || |||| ||| | || |||||||| |||||| ||| || ||| ||| ||||| | | Sbjct 16299 TCTTCTC-GACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGG 16241 Query 213864 GTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCG 213923 | | || || || ||| || || || || ||||| || || | || || Sbjct 16240 GCGCGAACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCA 16181 Query 213924 TGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACC 213980 ||||| ||||| | ||||| ||||| || || || | |||| || || ||||| || Sbjct 16180 TGCCAAGGCTCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACG 16121 Query 213981 AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTG 214040 ||||| ||||||| | ||| || | || || | |||||||| || || Sbjct 16120 TATCTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTA 16061 Query 214041 GTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCG 214100 ||||| | || || || || | ||| | | | | ||| ||| || || ||||| Sbjct 16060 GTTCCTGAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCA 16001 Query 214101 GCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCA 214160 ||| ||||||||||||||| || | ||| || || || || | |||||||| Sbjct 16000 GCGGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCT 15941 Query 214161 TCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAA 214220 || | | || | | ||||||| | ||||| | | | || |||| |||||| Sbjct 15940 TCCTTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAA 15881 Query 214221 AGCGTGGGGCTGGCATG 214237 || ||||| |||||| Sbjct 15880 AGAGTGGGTGAGGCATG 15864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530832136960