Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq57 127 4e-24 seq2 116 7e-21 >seq57 Length=16334 Score = 127 bits (140), Expect = 4e-24 Identities = 533/828 (64%), Gaps = 22/828 (3%) Strand=Plus/Minus Query 222031 GACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG 222090 ||||| || |||||| | |||||| |||| || || | || || || | || || Sbjct 16292 GACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAAC 16233 Query 222091 CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGG 222150 || || ||||| ||| || | || || | |||||| || | ||||| ||||| || Sbjct 16232 TTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGG 16173 Query 222151 CTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTC 222210 ||| ||||||| || | ||| || || |||||||||||||| || || || || | Sbjct 16172 CTCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGC 16113 Query 222211 CAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTT 222270 | |||||| | |||||| |||| || | |||||||| ||| || || || Sbjct 16112 GGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGA 16053 Query 222271 AATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCAG-ACATGCCGATACCACCGGCGTG 222327 ||||| | ||| ||| | || | | ||| | | || |||||||| ||| Sbjct 16052 GATGTATGAACCTGTGGCGC---GGATGCGGTGGATGTTGAGACCAATACCACCAGCGGT 15996 Query 222328 TTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTT 222387 || ||||||||||| || |||| | ||||| || || || || ||| ||||| Sbjct 15995 CTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCTTCCTT 15936 Query 222388 GACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTGGAACAGGCGTTAAACAGCG 222446 | || | || || || || | | ||| | ||| || | || || || || || | Sbjct 15935 CATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCA-GCATTGAAAAGAG 15877 Query 222447 TGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTA-CGACTCTG 222505 |||| ||| || || || | | | ||||||| | || || || | | | || Sbjct 15876 TGGGTGAGGCATGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTT 15817 Query 222506 GCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCC 222565 | ||| | || ||||| |||| || || | |||| ||||| ||| || | || Sbjct 15816 G-GATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGTGCTGTGGGCGTTCA 15758 Query 222566 ACAGGACC--CTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGT 222623 ||| ||| ||| | |||| |||||| || ||||||||||||||||||| Sbjct 15757 ACA--ACCTGCTTATCCATACGAAGCAAGTACGAACGCTCAAGAGTCTTGAACCCAAAGT 15700 Query 222624 AGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGC---TCCGACTTGTGCT 222680 | | | || ||||||| | ||| || | || | || ||| ||||| | | | Sbjct 15699 ATTGGTAGTTGAAGTCTCGGTCGTAGACGATCGCAGAGTTAAGCTCATCCGAATGTTTCA 15640 Query 222681 TTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCGGGGT 222740 | || | |||| | | |||| ||| | | |||||| || | || | |||| Sbjct 15639 TGACAGT---CTCGTAGACCCGCTGAGAGATCATAGGAGCGGGCTTCCTTGTTTTAGGGT 15583 Query 222741 TAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTTGTGC 222799 | || |||||| || | | | || || |||||||| | || | ||||||||||| Sbjct 15582 TGTAGTAGTGGTAGAGATCCGAGATAACAGCAGAGAACTGCTTCTTG-GTCTGCTTGTGA 15524 Query 222800 AGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGC 222847 || || ||||||||||| || | ||| | || | ||||| || ||| Sbjct 15523 AGGTTGGACACGGCGATACGTGCCGCGAGAATGGCGTAGTCGGGATGC 15476 >seq2 Length=1065396 Score = 116 bits (128), Expect = 7e-21 Identities = 292/449 (65%), Gaps = 13/449 (3%) Strand=Plus/Minus Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || || || || ||||| ||||||||||| ||||| ||||| || ||||| || ||||| Sbjct 669062 CGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTCGCTTCCATC 669003 Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998 || ||||| ||| || || |||||| || |||| || || ||||| ||||| Sbjct 669002 TTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAACTCATTTCA 668943 Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCAC 26058 | || ||||| | || | || ||||| || |||||| | || |||||| | Sbjct 668942 CGTGATGAGGGGATGCATACTGACTTTGCTTGTTTGCTCTTCTCG---CACTTG----AG 668890 Query 26059 AAACCTTCTCAAGAGACCGTCTA----CAGTATCATCAAAGAGGCTGTGGAGATCGAGAA 26114 ||||| | || | | ||| | ||| |||| ||||||||| ||||||| | Sbjct 668889 AAACCGCCCCAGCCAAGCTGCTATTCTCGCTATTATCACCGAGGCTGTGACGATCGAGCA 668830 Query 26115 GGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAG 26174 | | ||| | || ||||| || | |||| Sbjct 668829 GAAATTTTTGACTGAGGCTCTGCCATGTGCTCTGCTAGGGATGAATTCCAACTTGATGAA 668770 Query 26175 CCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCT 26233 |||||||| |||| || || || | ||||| || | ||| || | | || || Sbjct 668769 GCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGC-GCTTGGCAACCAGAAACACT 668711 Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 || | || | || || |||||||| ||||| | || || |||| ||| |||||||||| Sbjct 668710 ACCATTCGGCCAATCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGCAAGACCAACT 668651 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 |||| || ||||||||||| ||||||||| Sbjct 668650 TCTTCGAGAAGAGGGTCGGTGACTATCAA 668622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842837815360