Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq57 127 4e-24
seq2 116 7e-21
>seq57
Length=16334
Score = 127 bits (140), Expect = 4e-24
Identities = 533/828 (64%), Gaps = 22/828 (3%)
Strand=Plus/Minus
Query 222031 GACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG 222090
||||| || |||||| | |||||| |||| || || | || || || | || ||
Sbjct 16292 GACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAAC 16233
Query 222091 CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGG 222150
|| || ||||| ||| || | || || | |||||| || | ||||| ||||| ||
Sbjct 16232 TTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGG 16173
Query 222151 CTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTC 222210
||| ||||||| || | ||| || || |||||||||||||| || || || || |
Sbjct 16172 CTCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGC 16113
Query 222211 CAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTT 222270
| |||||| | |||||| |||| || | |||||||| ||| || || ||
Sbjct 16112 GGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGA 16053
Query 222271 AATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCAG-ACATGCCGATACCACCGGCGTG 222327
||||| | ||| ||| | || | | ||| | | || |||||||| |||
Sbjct 16052 GATGTATGAACCTGTGGCGC---GGATGCGGTGGATGTTGAGACCAATACCACCAGCGGT 15996
Query 222328 TTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTT 222387
|| ||||||||||| || |||| | ||||| || || || || ||| |||||
Sbjct 15995 CTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCTTCCTT 15936
Query 222388 GACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTGGAACAGGCGTTAAACAGCG 222446
| || | || || || || | | ||| | ||| || | || || || || || |
Sbjct 15935 CATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCA-GCATTGAAAAGAG 15877
Query 222447 TGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTA-CGACTCTG 222505
|||| ||| || || || | | | ||||||| | || || || | | | ||
Sbjct 15876 TGGGTGAGGCATGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTT 15817
Query 222506 GCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCC 222565
| ||| | || ||||| |||| || || | |||| ||||| ||| || | ||
Sbjct 15816 G-GATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGTGCTGTGGGCGTTCA 15758
Query 222566 ACAGGACC--CTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGT 222623
||| ||| ||| | |||| |||||| || |||||||||||||||||||
Sbjct 15757 ACA--ACCTGCTTATCCATACGAAGCAAGTACGAACGCTCAAGAGTCTTGAACCCAAAGT 15700
Query 222624 AGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGC---TCCGACTTGTGCT 222680
| | | || ||||||| | ||| || | || | || ||| ||||| | | |
Sbjct 15699 ATTGGTAGTTGAAGTCTCGGTCGTAGACGATCGCAGAGTTAAGCTCATCCGAATGTTTCA 15640
Query 222681 TTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCGGGGT 222740
| || | |||| | | |||| ||| | | |||||| || | || | ||||
Sbjct 15639 TGACAGT---CTCGTAGACCCGCTGAGAGATCATAGGAGCGGGCTTCCTTGTTTTAGGGT 15583
Query 222741 TAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTTGTGC 222799
| || |||||| || | | | || || |||||||| | || | |||||||||||
Sbjct 15582 TGTAGTAGTGGTAGAGATCCGAGATAACAGCAGAGAACTGCTTCTTG-GTCTGCTTGTGA 15524
Query 222800 AGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGC 222847
|| || ||||||||||| || | ||| | || | ||||| || |||
Sbjct 15523 AGGTTGGACACGGCGATACGTGCCGCGAGAATGGCGTAGTCGGGATGC 15476
>seq2
Length=1065396
Score = 116 bits (128), Expect = 7e-21
Identities = 292/449 (65%), Gaps = 13/449 (3%)
Strand=Plus/Minus
Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938
|| || || || ||||| ||||||||||| ||||| ||||| || ||||| || |||||
Sbjct 669062 CGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTCGCTTCCATC 669003
Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
|| ||||| ||| || || |||||| || |||| || || ||||| |||||
Sbjct 669002 TTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAACTCATTTCA 668943
Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCAC 26058
| || ||||| | || | || ||||| || |||||| | || |||||| |
Sbjct 668942 CGTGATGAGGGGATGCATACTGACTTTGCTTGTTTGCTCTTCTCG---CACTTG----AG 668890
Query 26059 AAACCTTCTCAAGAGACCGTCTA----CAGTATCATCAAAGAGGCTGTGGAGATCGAGAA 26114
||||| | || | | ||| | ||| |||| ||||||||| ||||||| |
Sbjct 668889 AAACCGCCCCAGCCAAGCTGCTATTCTCGCTATTATCACCGAGGCTGTGACGATCGAGCA 668830
Query 26115 GGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAG 26174
| | ||| | || ||||| || | ||||
Sbjct 668829 GAAATTTTTGACTGAGGCTCTGCCATGTGCTCTGCTAGGGATGAATTCCAACTTGATGAA 668770
Query 26175 CCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCT 26233
|||||||| |||| || || || | ||||| || | ||| || | | || ||
Sbjct 668769 GCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGC-GCTTGGCAACCAGAAACACT 668711
Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293
|| | || | || || |||||||| ||||| | || || |||| ||| ||||||||||
Sbjct 668710 ACCATTCGGCCAATCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGCAAGACCAACT 668651
Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
|||| || ||||||||||| |||||||||
Sbjct 668650 TCTTCGAGAAGAGGGTCGGTGACTATCAA 668622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842837815360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |