Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq28 105 4e-17
seq15 95.1 8e-14
>seq28
Length=470712
Score = 105 bits (116), Expect = 4e-17
Identities = 158/219 (72%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 474659 CCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG-AGCTCATATCT 474717
|||||| | || || | |||||| | | |||||||| | | |||| || | |||||
Sbjct 127957 CCGGAAGAGATCTCCGCCATGGTTCTTGGTAAAATGAAGGAGATCGCGGAGAGC-TATCT 127899
Query 474718 TGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAAC 474776
||| ||||||| | || | || || | |||||||| || ||||| || || |||||
Sbjct 127898 TGG-CAAGAAGGTCACCCACGCCGTTGTCACTGTTCCGGCCTATTTCAACGACGCTCAAA 127840
Query 474777 GTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATG 474836
| ||||||||||| || || || | ||| | || || || ||| | ||||| | || |
Sbjct 127839 GGCAAGCAACTAAGGACGCTGGTACCATTTCTGGCCTGAACGTTCTCCGTATCGTCAACG 127780
Query 474837 AACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875
| ||||| || ||||| |||| |||||||| || ||||
Sbjct 127779 AGCCAACGGCCGCCGCCATTGCGTATGGTCTGGACAAGA 127741
>seq15
Length=722239
Score = 95.1 bits (104), Expect = 8e-14
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || ||||| ||||| || |||||| | || ||||| | || ||
Sbjct 457563 ACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAGAGCGT 457622
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||||| ||||| ||||| || || | || || || ||||||||||||||
Sbjct 457623 CCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATTCC 457682
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||| || |||||||| ||||| || || || |||| || | || ||||
Sbjct 457683 TTCCTTATCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAA-CCTCAA 457741
Query 480730 GGGTAATAGTTTTACCGGTGA 480750
|||| || || || |||||||
Sbjct 457742 GGGTGATGGTCTTGCCGGTGA 457762
Score = 93.3 bits (102), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || | || || ||||| || || | || || || | |||||
Sbjct 456588 ACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAAAGAGT 456647
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||| ||||| || || | || || || || ||||| || ||
Sbjct 456648 ACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACC 456707
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||| |||||||||||| |||||| ||||| ||||||| | || ||
Sbjct 456708 CTCCTTATCTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACCTCGAG 456767
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||| ||||| || || |||||||| ||||| || ||
Sbjct 456768 GGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTG 456806
Score = 93.3 bits (102), Expect = 3e-13
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || ||||| || || |||||| | || || || | || ||
Sbjct 457272 ACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGT 457331
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||| ||||| || || || || || | |||||| || || ||||| |||||
Sbjct 457332 GCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCC 457391
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||||||||||||||||| || ||| || || || || | | | | | |||
Sbjct 457392 TTCCTTGTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAA 457451
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762
||| || || || || ||||||||||| ||||
Sbjct 457452 -GGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483
Score = 87.8 bits (96), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || || ||||| || |||||| | || || || | || ||
Sbjct 457044 ACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGT 457103
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||| || ||||| ||||| || |||||||| || || ||||| || || ||
Sbjct 457104 GCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCC 457163
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||||||| |||||||| || ||| || || || || | | | | | |||
Sbjct 457164 TTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAA 457223
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| || || ||||||||||| || ||
Sbjct 457224 -AGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTG 457262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268171950770012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |