Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq82 141 1e-28 seq26 122 1e-22 seq57 105 8e-18 seq2 102 1e-16 >seq82 Length=10320 Score = 141 bits (156), Expect = 1e-28 Identities = 793/1245 (64%), Gaps = 32/1245 (3%) Strand=Plus/Plus Query 75704 CTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTC 75763 || |||| || || | |||||||||||||| ||| || | | ||| | || ||| Sbjct 1 CTATGGACCCCGGATTTGTTCATGAAGCGGGTCGAGAAGAATCAGGATTGGACACTCTTC 60 Query 75764 TGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTAC 75823 || || | |||| || ||||| |||||| | || || || || |||||||| ||| Sbjct 61 TGCCCCAATGAGGCTCCTGGTCTGGCCGACGTGTATGGCGATGAATTCGAAGCCCTTTAC 120 Query 75824 ACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAA 75882 ||||||||| |||| || | | | | || | |||| | || | | ||| | Sbjct 121 GAGAAGTATGAAAAGGAAGGCCGTGGCCGCACATCTATCAAAGCC-CAGAAGCTGTGGTA 179 Query 75883 GGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTG 75942 || ||||| || | || || ||||| |||| || | |||||||||||||||||||| Sbjct 180 CGCAATTCTGGAAGCTCAAACAGAGACCGGAAACCCCTTCATGCTTTACAAGGATGCTTG 239 Query 75943 TAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGA 76002 ||| ||||| ||||| || ||| | || || ||| ||||| ||||| |||||||| Sbjct 240 CAACCGCAAGAGCAACCAGAAAAATCTTGGTACTATCCGAAGCTCCAATCTCTGCACGGA 299 Query 76003 AATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCT 76062 ||| | || ||||| | |||||| ||||| ||||| | || || ||||| || Sbjct 300 AATCGTCGAATACACTGCCCCAGATGAGGTTGCTGTGTGCAACCTTGCTTCGATCGCTCT 359 Query 76063 TCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCAC 76122 || | | || ||| | | || | ||| | | ||||| || || |||| Sbjct 360 GCCTACCTTCGTTGATGCTGTCAACGGCGTCTATGACTTCGGCAAACTACACGAGGTCAC 419 Query 76123 AAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGA 76179 || |||| ||| || | ||| | || || ||| || || || || Sbjct 420 CCAGGTTGTGGTCAAGAACTTGAACAAGATTATCGATGTCAATCACTACCCAGTCCCAGA 479 Query 76180 GACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGC 76239 | || | ||| || | |||||||| ||||||| | ||||| || ||||| || Sbjct 480 GGCTAAG---AAGAGCAACTTCCGACACAGGCCTATTGCAGTAGGTGTCCAGGGTCTGGC 536 Query 76240 GGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATG 76298 || | ||| | | ||| || | | || ||||| | || ||| || ||||| Sbjct 537 TGACGCATTCCTGGCTCTGCGTCTTC-CTTTCGATTCTCCGCAGGCGAAGCAGTTGAATA 595 Query 76299 CTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC--TGA 76356 || ||||| || || || || ||||| |||||| || ||||| | || || Sbjct 596 TTCAGATCTTCGAGACTATCTACCACGCGTCCCTGACAGCTTCCTGTGAGCTTGCCAAGA 655 Query 76357 AGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTT 76416 | | | || | || ||| | | |||||| ||||| | || ||||| | || |||| Sbjct 656 AACTC--GGCCCGTACGAGTCGTATGAGGGATCTCCTGTATCTCAAGGCATTCTGCAGTA 713 Query 76417 TGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAGGAACGC 76474 ||| |||| |||| || | || | | | | | || ||||||| | |||||| Sbjct 714 TGACATGT-GGAATGTCACCCCGA-CAGACCTTTGGGATTGGGATGCATTGAAGGAAGAG 771 Query 76475 ATCAAGGAGAAGGGTCTTCGTAACAGTCTT--TTGATGGCACCAATGCCAACAGCCTCCA 76532 || | | | ||| || | ||||| ||| ||| | ||||| ||||| || ||| | Sbjct 772 ATTGCAGCGCATGGTGTTAGGAACAG-CTTGCTTG-TTGCACCCATGCCGACCGCCAGTA 829 Query 76533 CC-GCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTG 76591 || | | | || |||| || || ||||| || ||||||||| | ||||||||| Sbjct 830 CCAGTATGATTC-TGGGATTCAACGAGTGCTTCGAGCCATACACATCCAACATCTACTCT 888 Query 76592 AGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAG 76651 | | ||| || || ||||| | |||||| || | || || || Sbjct 889 CGCCGTGTCCTTGCCGGAGAGTTCCAAGTCGTCAACCCCTGGCTTCTGAAGGATCTTGTT 948 Query 76652 AAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATT 76711 | || ||||| ||||| | | |||||| | | || | | |||||||| || Sbjct 949 GACATGGGTCTATGGTCAGATAACATGAAGAACCGTATCATTGCCGATGGTGGTTCAATC 1008 Query 76712 CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATC 76771 ||||| || | ||||||| | || ||||| |||||| || || ||||||||| Sbjct 1009 CAAAACATTCCCAATATCCCTGCCGACCTCAAGGCGCTCTACAAGACTGTCTGGGAAATC 1068 Query 76772 ---AAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGC-TTCATTGATCAAAG 76827 || | | | | || | |||||||| |||||||| ||| ||||||||||| Sbjct 1069 TCTCAG-CGCACCA--TTGTTCAGATGGCCGCTGATCGTGG-CGCGTTCATTGATCAGTC 1124 Query 76828 TCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATAT 76887 |||| | | || | |||| || || || ||| |||| || | ||||| | Sbjct 1125 TCAATCTCTCAACATTCACATGAAAGAACCCACCATGGGCAAGATCACGAGCATGCACTT 1184 Query 76888 GTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | |||||| | || || || || || |||||||| || || Sbjct 1185 CGCTGGGTGGAAGCTTGGTCTTAAGACGGGCATGTACTACCTACG 1229 >seq26 Length=513936 Score = 122 bits (134), Expect = 1e-22 Identities = 168/232 (72%), Gaps = 16/232 (7%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||||||||| || ||||| ||| ||||| | ||| || ||||| || |||||| | Sbjct 306120 GGTGCCAAGATTCCTCGAGGTGCCATTCTCTCTGGTCCACCTGGTACAGGTAAGACCTTG 306179 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGC--CGCAA 175393 || ||| ||||| |||||||||||| ||||| ||| | ||| | || || | | Sbjct 306180 CTAGCCAAAGCCACCGCGGGTGAATCTGGAGTCCCTTTC-TTCAGCG-TCAGCGGCTCTG 306237 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | || || ||||||||||||||||| ||| | || || |||||||||| ||| Sbjct 306238 AGTTCGTCGAGATGTTTGTTGGTGTTGGTCCTTCGAGAGTGCGCGATCTCT------TCG 306291 Query 175454 CCCGCG------AAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 |||| | ||||| || || ||| | |||||||||||||||||||| Sbjct 306292 CCCGAGCGAAGAAAAATGCGCCTTGCATTATTTTCATTGATGAGATTGATGC 306343 >seq57 Length=16334 Score = 105 bits (116), Expect = 8e-18 Identities = 352/546 (64%), Gaps = 25/546 (5%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| |||||||||| ||| | | |||||||| ||||| || | | Sbjct 15764 CCCACAGCACATGATCATGCGGGTGGCAGTGGAGATCCACGGTGAAGATATCCAAGGGGC 15823 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | || ||||| || ||||||| | ||| || |||| ||| || |||| || || | Sbjct 15824 AATCGAAACATATAACTTGATGTCCAACAGGCAT-TTCACTCATGCCTCACCCACTCTTT 15882 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||||||||| || || | ||||| | || |||||||| |||| || ||||| | Sbjct 15883 TCAATGCTGGGACGCCTAATGCGCAGCTTGCCTCCTGCTTCCTCATCGACATGAAGGAAG 15942 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | ||||| || | || | | | ||||| ||||| ||| |||| Sbjct 15943 ACAGCATTGAAGGTATSTACGACACCTTGAAGACTTGTGCCATGATCTCCAAGACCGCTG 16002 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCA-------ATAAATCTCGTATTCGG 75502 | |||||||| | ||||||| | | |||| ||| ||||| Sbjct 16003 GTGGTATTGGTCTCAACATCCACCGCATCCGCGCCACAGGTTCATACATCTC-------A 16055 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || |||||| || | ||||| |||| ||||||||||| || ||| || || Sbjct 16056 GGAACTAATGGTTCCTCCAACGGTATCGTTCCGATGCTTCGCGTGTTCAACAATACCGCC 16115 Query 75563 CGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAA 75616 | || || | |||| || ||||| || || | | || |||| | || Sbjct 16116 AGATACGTCGACCAAGGTGGCAACAAGCGTC-CA--GGTGCTTTTGCTATCTATCTTGAG 16172 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 || |||||||| ||| | | ||||| || || ||||| ||||| || | ||||| Sbjct 16173 CCTTGGCATGCTGATGTGTTCGAGTTTCTCGACCTACGAAAGAACCACGGCAAAGAAGAA 16232 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 | ||| | || || || | || |||| || || | |||||||||||||| Sbjct 16233 GTTCGCGCCCGTGACCTATTCCTCGCYCTATGGACCCCGGATTTGTTCATGAAGCGGGTC 16292 Query 75737 GAGGAG 75742 ||| || Sbjct 16293 GAGAAG 16298 >seq2 Length=1065396 Score = 102 bits (112), Expect = 1e-16 Identities = 152/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 65001 CCAA-ACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACA 65058 |||| || || ||||| ||| || ||||| | ||||| || |||| | | ||| Sbjct 669142 CCAATACAGTTCCATGCATTCGTAATAAGGCAGACTGGGCCATCCGATGGATACAAGACA 669083 Query 65059 AAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTC 65118 || ||| ||||||| | ||||| | || |||||| ||||||||||||||||||| Sbjct 669082 AAAATTCGA-CCTTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTC 669024 Query 65119 TCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGC 65178 || || ||| | || | |||| | |||||||| || |||||||| || || | Sbjct 669023 AGTGGCTCGTTCGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCT 668964 Query 65179 TTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 ||||| || ||||| ||||| || |||||||| Sbjct 668963 TTCTCGAACGAACTCATTTCACGTGATGAGGG 668932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568339746720