Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq15 113 4e-20
seq82 84.2 2e-11
>seq15
Length=722239
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || ||||| ||||| ||||| || ||| | |
Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| |||||| ||||| || || || || ||||| || ||
Sbjct 456749 GATACGATTGACAACGTCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCAG 456690
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || |||||||||||| | | | ||||| || |||
Sbjct 456689 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAAC 456630
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || ||||||||| ||||
Sbjct 456629 ATCCAGAAGGAGAGTACCCTGCACTTGGTGCTGCG 456595
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || ||||| || || || || || ||||| ||| || ||
Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| |||||||||||||| || || || || || || ||
Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || ||||||||||||||| | | || || || |||
Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || | |||||||| | || |||| || ||
Sbjct 456857 ATTCAGAAGGAGAGCACTTTGCACTTGGTCCTTCGTCTGCGTGGTGG 456811
Score = 104 bits (114), Expect = 2e-17
Identities = 99/127 (78%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846
|||||| |||||||| |||||||| |||||||| || |||||||||||||| ||||| ||
Sbjct 457410 AAAGATTCAAGACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTGATCTTCGCCGGCAA 457351
Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906
||| || || ||| | | | |||| || || ||||| || || ||||| || || ||
Sbjct 457350 ACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAATCAACCCTCCA 457291
Query 24907 CTTGGTG 24913
|||||
Sbjct 457290 TCTGGTG 457284
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || ||||| || || || | || || || | |
Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || || || || ||
Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||| || ||| | | | |||| || || |||
Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || ||||| || || ||| | |||
Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTG 457056
>seq82
Length=10320
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 139081 ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCA 139140
||||| || | ||||||||| || || || || ||| | |||||||||| ||||| |
Sbjct 353 ATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTG 294
Query 139141 CACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCA 139200
|| | ||| | ||| ||||| | ||||| || ||||| || ||||| ||||||
Sbjct 293 CAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCA 234
Query 139201 TCTTTGTAAAGCAT 139214
|| |||||||||||
Sbjct 233 TCCTTGTAAAGCAT 220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896649591320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |