Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq15 113 4e-20 seq82 84.2 2e-11 >seq15 Length=722239 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| ||||| ||||| || ||| | | Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||| ||||| || || || || ||||| || || Sbjct 456749 GATACGATTGACAACGTCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCAG 456690 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || |||||||||||| | | | ||||| || ||| Sbjct 456689 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAAC 456630 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || ||||||||| |||| Sbjct 456629 ATCCAGAAGGAGAGTACCCTGCACTTGGTGCTGCG 456595 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || || || ||||| ||| || || Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||||||||||| || || || || || || || Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || ||||||||||||||| | | || || || ||| Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGCGACTACAAC 456858 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || | |||||||| | || |||| || || Sbjct 456857 ATTCAGAAGGAGAGCACTTTGCACTTGGTCCTTCGTCTGCGTGGTGG 456811 Score = 104 bits (114), Expect = 2e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 |||||| |||||||| |||||||| |||||||| || |||||||||||||| ||||| || Sbjct 457410 AAAGATTCAAGACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTGATCTTCGCCGGCAA 457351 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||| || || ||| | | | |||| || || ||||| || || ||||| || || || Sbjct 457350 ACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAATCAACCCTCCA 457291 Query 24907 CTTGGTG 24913 ||||| Sbjct 457290 TCTGGTG 457284 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || ||||| || || || | || || || | | Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || || || || || Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| || ||| | | | |||| || || ||| Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || || ||||| || || ||| | ||| Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTG 457056 >seq82 Length=10320 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 139081 ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCA 139140 ||||| || | ||||||||| || || || || ||| | |||||||||| ||||| | Sbjct 353 ATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTG 294 Query 139141 CACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCA 139200 || | ||| | ||| ||||| | ||||| || ||||| || ||||| |||||| Sbjct 293 CAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCA 234 Query 139201 TCTTTGTAAAGCAT 139214 || ||||||||||| Sbjct 233 TCCTTGTAAAGCAT 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896649591320