Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq15 105 5e-18 >seq15 Length=722239 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||||||||| || || || || || || ||||| || || | || || || Sbjct 456594 ACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCC 456653 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | ||||||| ||||| || || || |||||||| || Sbjct 456654 ATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTT 456713 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| |||| |||||| | || | || |||||| ||| || || || || | Sbjct 456714 ATCTTG-AATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACCTCGAGGGTAA 456772 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | || || || || |||||||| Sbjct 456773 TCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 102 bits (112), Expect = 6e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||| ||| || || |||||||| || ||||| || || | | |||||| Sbjct 457278 ACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 457337 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| |||||||||||||| || | ||||| | |||||| || || || || || || || Sbjct 457338 ATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTT 457397 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| |||| || ||| | || | ||||| || || || || | || | Sbjct 457398 GTCTTG-AATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGA 457456 Query 29750 TAGTTTTGCCAGT 29762 | || |||||||| Sbjct 457457 TGGTCTTGCCAGT 457469 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||| || || | ||||| ||||||||||| || ||||| ||||| | Sbjct 457558 CCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAG 457617 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || || || |||||||| | ||||| | ||||| || || ||| Sbjct 457618 AGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 457677 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || || || ||| || | ||||| | || | |||||||| || || Sbjct 457678 ATTCCTTCCTTATCCTG-AATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAAC 457736 Query 29739 TTCAAGAGTTATAGTTTTGCCAGT 29762 ||||| || || || ||||| || Sbjct 457737 CTCAAGGGTGATGGTCTTGCCGGT 457760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218406568829